RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ZBTB49Q6ZSB9 765 aa11.93□□□□□ -0.5
CCND1-204ENST00000539241 OR4Q3Q8NH05 313 aa11.93□□□□□ -0.5
CCND1-204ENST00000539241 SLC25A19Q9HC21 320 aa11.93□□□□□ -0.5
CCND1-204ENST00000539241 NKIRAS2Q9NYR9 191 aa11.93□□□□□ -0.5
CCND1-204ENST00000539241 ORC6Q9Y5N6 252 aa11.93□□□□□ -0.5
CCND1-204ENST00000539241 A0A0A6YYJ9 748 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 H7C1C5 153 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
CCND1-204ENST00000539241 SLC2A10O95528 541 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
CCND1-204ENST00000539241 CDAP32320 146 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 GRK5P34947 590 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 CRISP1P54107 249 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 RAD23AP54725 363 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 LCN6P62502 163 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 TEKQ02763 1124 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 GLO1Q04760 184 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 GINS1Q14691 196 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 MOGQ16653 247 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 PABPC1L2AQ5JQF8 200 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 THEM4Q5T1C6 240 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 PTCHD4Q6ZW05 846 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 JAZF1Q86VZ6 243 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.92□□□□□ -0.5
CCND1-204ENST00000539241 OR1J1Q8NGS3 322 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 OR4K13Q8NH42 304 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 GTF3AQ92664 365 aaKnown RBP11.92□□□□□ -0.5
CCND1-204ENST00000539241 RBP7Q96R05 134 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 GABARAPL3Q9BY60 117 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 KCNN2Q9H2S1 579 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 ZNF665Q9H7R5 613 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 SIAEQ9HAT2 523 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 RNPEPL1Q9HAU8 725 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
CCND1-204ENST00000539241 VSX1Q9NZR4 365 aaPredicted RBP11.92□□□□□ -0.5
CCND1-204ENST00000539241 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 CASQ2O14958 399 aaPredicted RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 TPD52L2O43399 206 aaKnown RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 VENTXO95231 258 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 IFNGP01579 166 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 CCNOP22674 350 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 PEX2P28328 305 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 CDKN2AP42771 156 aaKnown RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 CRYBB2P43320 205 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 MRPS34P82930 218 aaKnown RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 CDK5Q00535 292 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 MVKQ03426 396 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 FMODQ06828 376 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCND1-204ENST00000539241 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 RIPK1Q13546 671 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 SLC35F1Q5T1Q4 408 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 AVPI1Q5T686 147 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 FAHD2BQ6P2I3 314 aaPredicted RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 SLC25A47Q6Q0C1 308 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 USP51Q70EK9 711 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 CPEB3Q8NE35 698 aaKnown RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 OR52E2Q8NGJ4 325 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 NSMAFQ92636 917 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 NABP1Q96AH0 204 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 FAHD2AQ96GK7 314 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 TEX12Q9BXU0 123 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 SYT4Q9H2B2 425 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 DECR2Q9NUI1 292 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 KLHL21Q9UJP4 597 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
CCND1-204ENST00000539241 UGT2A1Q9Y4X1 527 aa11.91□□□□□ -0.5
CCND1-204ENST00000539241 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 PNPP00491 289 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 RENP00797 406 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 MT-ND5P03915 603 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 HMGN1P05114 100 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 ZNF3P17036 446 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 ZNF32P17041 273 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 STOMP27105 288 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 SLC34A1Q06495 639 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 PTGES3Q15185 160 aaKnown RBP11.9□□□□□ -0.5
CCND1-204ENST00000539241 SGCAQ16586 387 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 SPATA46Q5T0L3 261 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 ACSM5Q6NUN0 579 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 PACRGLQ8N7B6 248 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 NPEPL1Q8NDH3 523 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 RAB39BQ96DA2 213 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 SLC29A1Q99808 456 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 PRRG3Q9BZD7 231 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 RIBC2Q9H4K1 309 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 CMC2Q9NRP2 79 aa11.9□□□□□ -0.5
CCND1-204ENST00000539241 EIF3KQ9UBQ5 218 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms