RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 A0A1W2PRQ8 180 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 F5H0A9 414 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 TMEM178BH3BS89 294 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 IFNL4K9M1U5 179 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DYNC1I1O14576 645 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RER1O15258 196 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 H1F0P07305 194 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 MMP16P51512 607 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DGCR6Q14129 220 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 HLXQ14774 488 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 TUSC1Q2TAM9 212 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SLC27A4Q6P1M0 643 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DOK3Q7L591 496 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR5AS1Q8N127 324 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ELAC2Q9BQ52 826 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NUAK2Q9H093 628 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 EFCAB1Q9HAE3 211 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PTTG3PQ9NZH4 202 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZNF69Q9UC07 566 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR5V1Q9UGF6 321 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 IL20RAQ9UHF4 553 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 POLR1DQ9Y2S0 133 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FAM32AQ9Y421 112 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 IER3IP1Q9Y5U9 82 aa16.54■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SOCS2O14508 198 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NDUFAB1O14561 156 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DBHP09172 617 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 HKR1P10072 659 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PRTN3P24158 256 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FOXL1Q12952 345 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KCNMB1Q16558 191 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FGD3Q5JSP0 725 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KLF17Q5JT82 389 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 C8orf82Q6P1X6 216 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 FBXW12Q6X9E4 464 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DPY19L2P2Q6ZN68 376 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR8G5Q8NG78 346 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR13G1Q8NGZ3 307 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 APOBEC3DQ96AK3 386 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RSRC1Q96IZ7 334 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZNF582Q96NG8 517 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KCTD14Q9BQ13 255 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 ZMAT3Q9HA38 289 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 KRCC1Q9NPI7 259 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RPS6KA6Q9UK32 745 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 AURKCQ9UQB9 309 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 LRCH1Q9Y2L9 728 aa16.53■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DOCK11Q5JSL3 2073 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 CEACAM18A8MTB9 384 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 IMPA2O14732 288 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SNX3O60493 162 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NCK1P16333 377 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 CPT2P23786 658 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OMPP47874 163 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 CENPAP49450 140 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 SRP9P49458 86 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 RPS6KA3P51812 740 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR2T2Q6IF00 324 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 HACD2Q6Y1H2 254 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PTCHD4Q6ZW05 846 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 GJC3Q8NFK1 279 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 OR10AD1Q8NGE0 317 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 NDUFAF4Q9P032 175 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 PCDHGB1Q9Y5G3 927 aa16.52■□□□□ 0.24
TNFRSF1B-204ENST00000536782 DNAJC9-AS1A6NH13 148 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 UNC119BA6NIH7 251 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TXNDC12O95881 172 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 WNT2P09544 360 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RHCEP18577 417 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CRABP1P29762 137 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CDKN2AP42771 156 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 NUDT2P50583 147 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FXYD6P3P58550 94 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 BAMBIQ13145 260 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PGM2L1Q6PCE3 622 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DNM1P34Q6PK57 102 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 BCL6BQ8N143 479 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF420Q8TAQ5 688 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MEGF10Q96KG7 1140 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DUX5Q96PT3 197 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 COQ7Q99807 217 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF747Q9BV97 191 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SSBP3Q9BWW4 388 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FAM107BQ9H098 131 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 HDHD2Q9H0R4 259 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MYLK2Q9H1R3 596 aa16.51■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TRBV4-1A0A0J9YWV2 114 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GPANK1O95872 356 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RPS2P15880 293 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GNGT1P63211 74 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 HIST1H3AP68431 136 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PAX8Q06710 450 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 HIST2H3PS2Q5TEC6 136 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SHISA2Q6UWI4 295 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 HIST2H3AQ71DI3 136 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 OR52E2Q8NGJ4 325 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CMTM5Q96DZ9 223 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TSSK2Q96PF2 358 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms