RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DLL4Q9NR61 685 aa19.48■□□□□ 0.71
SFSWAP-204ENST00000535399 ACANP16112 2415 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 TRIM64A6NGJ6 449 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 TRIM64BA6NI03 449 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 M0R233 179 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 PRKYO43930 277 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 SSX4O60224 188 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 LY6HO94772 140 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 F12P00748 615 aaPredicted RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ALPLP05186 524 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ADRA2AP08913 450 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 SLC2A5P22732 501 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 MPV17P39210 176 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 NUDT6P53370 316 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 KLF3P57682 345 aaPredicted RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 SELENOVP59797 346 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 EFNB1P98172 346 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ECH1Q13011 328 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ZNF718Q3SXZ3 478 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 TMEM255AQ5JRV8 349 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 MBNL2Q5VZF2 373 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 CXXC5Q7LFL8 322 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 TIGD4Q8IY51 512 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ZMYND19Q96E35 227 aaPredicted RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 INTS14Q96SY0 518 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 ATF6BQ99941 703 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 OR2J1Q9GZK6 312 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 POFUT1Q9H488 388 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 USE1Q9NZ43 259 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 TAAR3PQ9P1P4 343 aa19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 FLNAP21333 2647 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-204ENST00000535399 A0A1W2PPW3 197 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 ANKRD65E5RJM6 399 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 H3BSA7 217 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 M0R129 80 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 EI24O14681 340 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 PRODHO43272 600 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 IGHV3-13P01766 116 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 CD99P14209 185 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 KLHL12Q53G59 568 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 SLC35D3Q5M8T2 416 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 DCXRQ7Z4W1 244 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 ERI1Q8IV48 349 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 KLF14Q8TD94 323 aaPredicted RBP19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 PRRG3Q9BZD7 231 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 RIBC2Q9H4K1 309 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 DDX28Q9NUL7 540 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 STARD10Q9Y365 291 aa19.46■□□□□ 0.71
SFSWAP-204ENST00000535399 ACSM4P0C7M7 580 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 RGS6P49758 472 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 CBR4Q8N4T8 237 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 OR6N2Q8NGY6 317 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 ST7LQ8TDW4 575 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 IPCEF1Q8WWN9 437 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 RAB1BQ9H0U4 201 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 TPK1Q9H3S4 243 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 SLCO1C1Q9NYB5 712 aa19.45■□□□□ 0.7
SFSWAP-204ENST00000535399 TEP1Q99973 2627 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 CCDC182A6NF36 153 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 J3QW42 95 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 TUBG1P23258 451 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 GCH1P30793 250 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 ALDH3A2P51648 485 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 TNK1Q13470 666 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 APOFQ13790 326 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 ALKBH6Q3KRA9 238 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 COLCA1Q6ZS62 124 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 DPY19L4Q7Z388 723 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 CIARTQ8N365 385 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 ZNF525Q8N782 197 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 TCEANCQ8N8B7 351 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 STMN2Q93045 179 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 MS4A5Q9H3V2 200 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 TUBG2Q9NRH3 451 aa19.44■□□□□ 0.7
SFSWAP-204ENST00000535399 F5H5K5 113 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 H7C1Q1 480 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 TLX2O43763 284 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 SELENOFO60613 162 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 BAG2O95816 211 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 NAT2P11245 290 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 NKPD1Q17RQ9 610 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 AADACL4Q5VUY2 407 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 BCDIN3DQ7Z5W3 292 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 TMEM163Q8TC26 289 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 NEU4Q8WWR8 484 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 SLAMF6Q96DU3 332 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 COG8Q96MW5 612 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 C9orf16Q9BUW7 83 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 C1QTNF5Q9BXJ0 243 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 GPR160Q9UJ42 338 aa19.43■□□□□ 0.7
SFSWAP-204ENST00000535399 E9PQ18 207 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 OTX1P32242 354 aaPredicted RBP19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 DSCR9P59020 149 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 RPS7P62081 194 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 PSG7Q13046 419 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 EIF2B1Q14232 305 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 MOGQ16653 247 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 CLEC2AQ6UVW9 174 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 SHFQ7M4L6 423 aa19.42■□□□□ 0.7
SFSWAP-204ENST00000535399 NAA40Q86UY6 237 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms