RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CDK6Q00534 326 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 HMGCS1Q01581 520 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 KEAP1Q14145 624 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 KCTD19Q17RG1 926 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 NKPD1Q17RQ9 610 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 PROX2Q3B8N5 592 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 MORN2Q502X0 79 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ARSIQ5FYB1 569 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 IDNKQ5T6J7 187 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SAXO2Q658L1 398 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CPZQ66K79 652 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF770Q6IQ21 691 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 LARP4Q71RC2 724 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 C6orf120Q7Z4R8 191 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 OAFQ86UD1 273 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 PARGQ86W56 976 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SNX29P2Q8IUI4 249 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 C11orf42Q8N5U0 333 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CSNK1A1LQ8N752 337 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 BCORP1Q8N888 145 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SAMD12Q8N8I0 201 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SLC38A9Q8NBW4 561 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 OR52L2PQ8NGH6 319 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ZCCHC10Q8TBK6 192 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 M1APQ8TC57 530 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 GNPDA2Q8TDQ7 276 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 SNRNP40Q96DI7 357 aaKnown RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 REEP6Q96HR9 211 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 PYURFQ96I23 114 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 LINC00615Q96LM1 132 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF300Q96RE9 604 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ARHGDIGQ99819 225 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 C20orf24Q9BUV8 137 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 MS4A8Q9BY19 250 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CST9LQ9H4G1 147 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF385DQ9H6B1 395 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 NOX3Q9HBY0 568 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 PNPOQ9NVS9 261 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 OPTCQ9UBM4 332 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 JPT1Q9UK76 154 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 CFAP47Q6ZTR5 3102 aa6.77□□□□□ -1.33
HDAC3-216ENST00000523088 URB1O60287 2271 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PKD1L2Q7Z442 2459 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 FREM2Q5SZK8 3169 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ADAMTS20P59510 1910 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SPEGQ15772 3267 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 LOC105371242A0A075B767 164 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ANKRD66B4E2M5 251 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TRIM49D1C9J1S8 452 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 CORTO00230 105 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 UPK1AO00322 258 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 DLGAP1O14490 977 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RFXANKO14593 260 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 EPHB6O15197 1021 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SLC16A5O15375 505 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 OR2T1O43869 369 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ATP6AP2O75787 350 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 MT-ND1P03886 318 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ALDOAP04075 364 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 WNT1P04628 370 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 CTSLP07711 333 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ST6GAL1P15907 406 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ABOP16442 354 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 AMD1P17707 334 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SPINK2P20155 84 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 KITLGP21583 273 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 S100A7P31151 101 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PIGAP37287 484 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SLC6A8P48029 635 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SEC61GP60059 68 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TPI1P60174 286 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RPS16P62249 146 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 MXD1Q05195 221 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PDE7AQ13946 482 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PSG5Q15238 335 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RAB35Q15286 201 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 DPY19L1Q2PZI1 675 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF284Q2VY69 593 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 C6orf136Q5SQH8 315 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 NSUN5P2Q63ZY6 315 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TMEM198Q66K66 360 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 TRNP1Q6NT89 227 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF585AQ6P3V2 769 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RNASEKQ6P5S7 137 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 ZNF613Q6PF04 617 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 WDR74Q6RFH5 385 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 MBOAT2Q6ZWT7 520 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 PARS2Q7L3T8 475 aaKnown RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 CHMP1BQ7LBR1 199 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 H2BFWTQ7Z2G1 175 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 NIT1Q86X76 327 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 LAS2Q8IYD9 372 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 UMODL1-AS1Q8N2C9 162 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 SYS1Q8N2H4 156 aa6.76□□□□□ -1.33
HDAC3-216ENST00000523088 RYBPQ8N488 228 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-216ENST00000523088 OR5D13Q8NGL4 314 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms