RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TAS2R1Q9NYW7 299 aa14.47□□□□□ -0.09
SQLE-205ENST00000521232 PRPF19Q9UMS4 504 aaKnown RBP14.47□□□□□ -0.09
SQLE-205ENST00000521232 CDH10Q9Y6N8 788 aa14.47□□□□□ -0.09
SQLE-205ENST00000521232 CLDN25C9JDP6 229 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 BHLHE40O14503 412 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 CCNB2O95067 398 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 DBHP09172 617 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 PCMT1P22061 227 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 MVKQ03426 396 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 RSPO1Q2MKA7 263 aaPredicted RBP14.46□□□□□ -0.09
SQLE-205ENST00000521232 SLC36A3Q495N2 470 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 ZNF362Q5T0B9 420 aaPredicted RBP14.46□□□□□ -0.09
SQLE-205ENST00000521232 SLC35F1Q5T1Q4 408 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 AVPI1Q5T686 147 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 CORO6Q6QEF8 472 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 RASSF6Q6ZTQ3 369 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 SDR9C7Q8NEX9 313 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 OR52E2Q8NGJ4 325 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 CCL17Q92583 94 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 RAB1CQ92928 201 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 HDHD2Q9H0R4 259 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 POLR1DQ9Y2S0 133 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 WIPI2Q9Y4P8 454 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 WNK2Q9Y3S1 2297 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 DYSFO75923 2080 aa14.46□□□□□ -0.09
SQLE-205ENST00000521232 TANC2Q9HCD6 1990 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 PHF1O43189 567 aaPredicted RBP14.45□□□□□ -0.1
SQLE-205ENST00000521232 MSMBP08118 114 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 ANPEPP15144 967 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 RAC2P15153 192 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.45□□□□□ -0.1
SQLE-205ENST00000521232 SLC3A1Q07837 685 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 DBPQ10586 325 aaPredicted RBP14.45□□□□□ -0.1
SQLE-205ENST00000521232 PPP1R8Q12972 351 aaKnown RBP14.45□□□□□ -0.1
SQLE-205ENST00000521232 KRTAP27-1Q3LI81 207 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 FAM98BQ52LJ0 330 aaKnown RBP14.45□□□□□ -0.1
SQLE-205ENST00000521232 SPRNQ5BIV9 151 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 CLEC12AQ5QGZ9 265 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 OR2T5Q6IEZ7 315 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 Q6ZR03 302 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.45□□□□□ -0.1
SQLE-205ENST00000521232 GLCCI1Q86VQ1 547 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 OR52L1Q8NGH7 329 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 OR5L1Q8NGL2 311 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 OR2T29Q8NH02 315 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 TMEM158Q8WZ71 300 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 TMEM186Q96B77 213 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 ASB9Q96DX5 294 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 TIMD4Q96H15 378 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 ZNF665Q9H7R5 613 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 HIF1ANQ9NWT6 349 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 FAM53CQ9NYF3 392 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 CYB5R1Q9UHQ9 305 aa14.45□□□□□ -0.1
SQLE-205ENST00000521232 RNF212BA8MTL3 300 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 DEAF1O75398 565 aaPredicted RBP14.44□□□□□ -0.1
SQLE-205ENST00000521232 GGT2P36268 569 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 TNFAIP6P98066 277 aaPredicted RBP14.44□□□□□ -0.1
SQLE-205ENST00000521232 MICAQ29983 383 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 SLC18B1Q6NT16 456 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 ACSM5Q6NUN0 579 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 COLCA1Q6ZS62 124 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 OR8D4Q8NGM9 314 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 OR51F2Q8NH61 342 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 APOBEC3DQ96AK3 386 aaPredicted RBP14.44□□□□□ -0.1
SQLE-205ENST00000521232 CDADC1Q9BWV3 514 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 DGCR6LQ9BY27 220 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 PLA2G12AQ9BZM1 189 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 FN3KQ9H479 309 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 MRPL22Q9NWU5 206 aaKnown RBP14.44□□□□□ -0.1
SQLE-205ENST00000521232 VNN3Q9NY84 501 aa14.44□□□□□ -0.1
SQLE-205ENST00000521232 ACOT8O14734 319 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 IGHV2-5P01817 119 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 HLA-DQA2P01906 255 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 TNFSF4P23510 183 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 ERFP50548 548 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 TRAP1Q12931 704 aaKnown RBP14.43□□□□□ -0.1
SQLE-205ENST00000521232 ECH1Q13011 328 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 CFAP77Q6ZQR2 320 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 LINC00346Q8IVM7 164 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 LNX2Q8N448 690 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 AQP11Q8NBQ7 271 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 OR2Z1Q8NG97 314 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 OR2AJ1Q8NGZ0 328 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 RAB39BQ96DA2 213 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 CLPTM1LQ96KA5 538 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 C1QTNF5Q9BXJ0 243 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 REEP1Q9H902 201 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 LPAR2Q9HBW0 351 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 IL19Q9UHD0 177 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 KCNG2Q9UJ96 466 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 U3KQV3 271 aa14.43□□□□□ -0.1
SQLE-205ENST00000521232 TRAV20A0A0B4J274 112 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 RAP2AP10114 183 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 TNFRSF1AP19438 455 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 GK3PQ14409 553 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 HLXQ14774 488 aaPredicted RBP14.42□□□□□ -0.1
SQLE-205ENST00000521232 PHC2Q8IXK0 858 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 CYB561A3Q8NBI2 242 aa14.42□□□□□ -0.1
SQLE-205ENST00000521232 OR2T4Q8NH00 348 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms