RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 A0A0J9YXY3 114 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 NCBP2LA6PVI3 153 aaKnown RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 IQCF5A8MTL0 148 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 XKRYO14609 159 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 PRMT5O14744 637 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RTL8CO15255 209 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 UTS2O95399 124 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TDP2O95551 362 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 YEATS4O95619 227 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ZDHHC11BP0C7U3 371 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ATF6P18850 670 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RAB5AP20339 215 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CCNE1P24864 410 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 LOXP28300 417 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 LCN1P31025 176 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 BTCP35070 178 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 FABP6P51161 128 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 MNAT1P51948 309 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 MAP3K7CLP57077 242 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 HERVK_113P61574 105 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RPS21P63220 83 aaKnown RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TNNC1P63316 161 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 PRR3P79522 188 aaKnown RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 XRCC4Q13426 336 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SLC39A6Q13433 755 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TFDP2Q14188 446 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 GPR176Q14439 515 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 PRPSAP1Q14558 356 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 LCE3EQ5T5B0 92 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CCNJQ5T5M9 372 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ERICH5Q6P6B1 374 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TEX43Q6ZNM6 134 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RNF165Q6ZSG1 346 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 UNC93AQ86WB7 457 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 HORMAD1Q86X24 394 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RALGPS2Q86X27 583 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TGIF2LYQ8IUE0 185 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 H1FOOQ8IZA3 346 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM61Q8N0U2 210 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SNX31Q8N9S9 440 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 MNS1Q8NEH6 495 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 DUSP18Q8NEJ0 188 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 NOXO1Q8NFA2 376 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 OR6Q1Q8NGQ2 317 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 OR6K6Q8NGW6 343 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 OR6N2Q8NGY6 317 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 OR10J6PQ8NGY7 276 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ANGPTL6Q8NI99 470 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 APH1BQ8WW43 257 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 BAALCQ8WXS3 180 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 OR8D1Q8WZ84 308 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TFGQ92734 400 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 NRBF2Q96F24 287 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 GALNT14Q96FL9 552 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 AURKBQ96GD4 344 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM101Q96IK0 257 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RNF170Q96K19 258 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SLC35E1Q96K37 410 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 COL21A1Q96P44 957 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 FOXC2Q99958 501 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CHID1Q9BWS9 393 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 HINT2Q9BX68 163 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SLC25A39Q9BZJ4 359 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 PARP12Q9H0J9 701 aaKnown RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SYT4Q9H2B2 425 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 LINC00597Q9H2U6 94 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SYNDIG1Q9H7V2 258 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 BEX1Q9HBH7 125 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 SPACA1Q9HBV2 294 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 KCNJ16Q9NPI9 418 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 STMN3Q9NZ72 180 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF629Q9UEG4 869 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CD300AQ9UGN4 299 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 RAB26Q9ULW5 256 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 ST3GAL6Q9Y274 331 aa1.62□□□□□ -2.15
LMNB1-207ENST00000494185 NOSIPQ9Y314 301 aaKnown RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CENPJQ9HC77 1338 aaPredicted RBP1.62□□□□□ -2.15
LMNB1-207ENST00000494185 CEMIPQ8WUJ3 1361 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 JCADQ9P266 1359 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 IGLV3-16A0A075B6K0 115 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 A0A0A6YYD5 115 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 GOLGA8QA0A0J9YX86 632 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 A0A1B0GUA9 196 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ERICH2A1L162 156 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 RAB19A4D1S5 217 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 HIDE1A8MVS5 230 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 HACD1B0YJ81 288 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ANKRD65E5RJM6 399 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 NME4O00746 187 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 GATCO43716 136 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ENTPD5O75356 428 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ZMPSTE24O75844 475 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 SMC2O95347 1197 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 KLF8O95600 359 aaPredicted RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 RAB3DO95716 219 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 BGLAPP02818 100 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CATP04040 527 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 RETP07949 1114 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 HOXC4P09017 264 aaPredicted RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CRISP2P16562 243 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms