RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PURGQ9UJV8 347 aaKnown RBP8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 B9D1Q9UPM9 204 aa8.23□□□□□ -1.09
TMEM39A-210ENST00000490099 PPIAL4EA0A075B759 164 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PPIAL4CA0A0B4J2A2 164 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PPIAL4DF5H284 164 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 SOCS2O14508 198 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ARPC2O15144 300 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 RER1O15258 196 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 GSC2O15499 205 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PLPP2O43688 288 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 IDH3BO43837 385 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 FSTL3O95633 263 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ABHD16AO95870 558 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PPIAL4FP0DN26 164 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 RAC2P15153 192 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 GSTM3P21266 225 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 CRABP1P29762 137 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 MSX2P35548 267 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 RPS6KA3P51812 740 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ZMAT1Q5H9K5 638 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF362Q5T0B9 420 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 AVPI1Q5T686 147 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 LIPNQ5VXI9 398 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF770Q6IQ21 691 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PGM2L1Q6PCE3 622 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ZNF283Q8N7M2 679 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ICA1LQ8NDH6 482 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC26A10Q8NG04 563 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 OR52J3Q8NH60 311 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 SLC7A6Q92536 515 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 CCL17Q92583 94 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 RAB1CQ92928 201 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PTP4A1Q93096 173 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 RAB39BQ96DA2 213 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 SAMD8Q96LT4 415 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 COG8Q96MW5 612 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 TSSK2Q96PF2 358 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 THTPAQ9BU02 230 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 MSL2Q9HCI7 577 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 PLEK2Q9NYT0 353 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ASH2LQ9UBL3 628 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 IL20RAQ9UHF4 553 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 POLR3KQ9Y2Y1 108 aaPredicted RBP8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 GRIP1Q9Y3R0 1128 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 LHFPL6Q9Y693 200 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
TMEM39A-210ENST00000490099 J3QLI3 93 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 DOK2O60496 412 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 GMNNO75496 209 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 CIB2O75838 187 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 KRT36O76013 467 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 GADD45GO95257 159 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 PPP1R3DO95685 299 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 FSHBP01225 129 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 GATA3P23771 443 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 SLC6A6P31641 620 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 GGT2P36268 569 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 MAGEA2P43356 314 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 HTR5AP47898 357 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 RGS6P49758 472 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 SRSF2Q01130 221 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 MVKQ03426 396 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 OTPQ5XKR4 325 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 LRRC28Q86X40 367 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 GJC3Q8NFK1 279 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 OR4C15Q8NGM1 316 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 ZFAND2BQ8WV99 257 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 CMBLQ96DG6 245 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 TIMD4Q96H15 378 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 ERMAPQ96PL5 475 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 SIGLEC11Q96RL6 698 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 COQ7Q99807 217 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 CADM1Q9BY67 442 aaKnown RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 TRIM15Q9C019 465 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 HDHD2Q9H0R4 259 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 OR52D1Q9H346 318 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 MUC13Q9H3R2 512 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 NARFLQ9H6Q4 476 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 KRCC1Q9NPI7 259 aaPredicted RBP8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 DCAF16Q9NXF7 216 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 IL20Q9NYY1 176 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 IL19Q9UHD0 177 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 OPN4Q9UHM6 478 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 AURKCQ9UQB9 309 aa8.21□□□□□ -1.1
TMEM39A-210ENST00000490099 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TCF21O43680 179 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 GPANK1O95872 356 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 PNPP00491 289 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 DBHP09172 617 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 HIST1H1CP16403 213 aaKnown RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 CPT2P23786 658 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 IFNGR2P38484 337 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 ERFP50548 548 aa8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TNFAIP6P98066 277 aaPredicted RBP8.2□□□□□ -1.1
TMEM39A-210ENST00000490099 TSPAN31Q12999 210 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms