RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 FBXO36Q8NEA4 188 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 DNASE2BQ8WZ79 361 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 FGF14Q92915 247 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 MSANTD3Q96H12 275 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 CSPG4P5Q96PW8 444 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 ECSITQ9BQ95 431 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 PELOQ9BRX2 385 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 NXF3Q9H4D5 531 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 AGPAT4Q9NRZ5 378 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 TREM2Q9NZC2 230 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 KCNIP1Q9NZI2 227 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 IFNKQ9P0W0 207 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 RWDD2AQ9UIY3 292 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 TRANK1O15050 2925 aa5.59□□□□□ -1.51
GAPVD1-217ENST00000479511 ANKRD11Q6UB99 2663 aaPredicted RBP5.59□□□□□ -1.52
GAPVD1-217ENST00000479511 LAMA4Q16363 1823 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 PVALEFA0A1B0GWK0 134 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 YKT6O15498 198 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 NR2C1P13056 603 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 AQP2P41181 271 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 TGFBR3Q03167 851 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ACVR1Q04771 509 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 RCAN2Q14206 197 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 SPECC1LQ69YQ0 1117 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 TTC23LQ6PF05 361 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 UBALD2Q8IYN6 164 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 INO80EQ8NBZ0 244 aaPredicted RBP5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 CXorf40AQ8TE69 158 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 PIH1D2Q8WWB5 315 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ECHDC3Q96DC8 303 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 VSIG2Q96IQ7 327 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ATP6V1G3Q96LB4 118 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 OR5B12Q96R08 314 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 SELENOIQ9C0D9 397 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 NTN4Q9HB63 628 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ACP6Q9NPH0 428 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 SAMSN1Q9NSI8 373 aaKnown RBP5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 HRASLS2Q9NWW9 162 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 ZNF581Q9P0T4 197 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 MOB4Q9Y3A3 225 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 UGT2A1Q9Y4X1 527 aa5.58□□□□□ -1.52
GAPVD1-217ENST00000479511 A0A1W2PRD5 423 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 USP27XA6NNY8 438 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 K7ERQ8 282 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 CDC7O00311 574 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 TBX6O95947 436 aaPredicted RBP5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 ACSM4P0C7M7 580 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 PRKACBP22694 351 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 LCN1P31025 176 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 KIR2DS4P43632 304 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 GPR4P46093 362 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 HSP90AA4PQ58FG1 418 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 OLFML2AQ68BL7 652 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 DEGS2Q6QHC5 323 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 SPESP1Q6UW49 350 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 MTERF4Q7Z6M4 381 aaKnown RBP5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 TMEM105Q8N8V8 129 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 ASZ1Q8WWH4 475 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 MED8Q96G25 268 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 TSG101Q99816 390 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 TMEM175Q9BSA9 504 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 ZYG11BQ9C0D3 744 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 ING4Q9UNL4 249 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 RIF1Q5UIP0 2472 aaKnown RBP5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 NOTCH4Q99466 2003 aa5.57□□□□□ -1.52
GAPVD1-217ENST00000479511 ASH1LQ9NR48 2969 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 RALGAPA2Q2PPJ7 1873 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 ABCB11O95342 1321 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 IGHV3OR16-13A0A075B7E8 117 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 A0A1B0GW55 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 SRRM5B3KS81 715 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 LOC730098B7Z3J9 87 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DYNC1I1O14576 645 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 POLR1CO15160 346 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 PI15O43692 258 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 STX10O60499 249 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 CLDN11O75508 207 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 IGHV3-13P01766 116 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L2P0CJ85 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L3P0CJ86 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L4P0CJ87 422 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L5P0CJ88 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L6P0CJ89 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 DUX4L7P0CJ90 424 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 CCDC166P0CW27 439 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 FOLR1P15328 257 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 ZNF250P15622 560 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 TCN1P20061 433 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 OR1E1P30953 314 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 SLC25A1P53007 311 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 ATP5J2P56134 94 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 MS4A2Q01362 244 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 TRAM2Q15035 370 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 SF3A2Q15428 464 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 GABRA6Q16445 453 aa5.56□□□□□ -1.52
GAPVD1-217ENST00000479511 GPR157Q5UAW9 335 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms