RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CPN1P15169 458 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 COL9A1P20849 921 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 SLC16A14Q7RTX9 510 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 MKXQ8IYA7 352 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 AGBL5Q8NDL9 886 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 NUDT9Q9BW91 350 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 LRP12Q9Y561 859 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 CSAG2Q9Y5P2 127 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 POU3F2P20265 443 aaPredicted RBP15.03■□□□□ -0
TCOF1-206ENST00000445265 SSR4P51571 173 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 HMGN3Q15651 99 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 ZNF626Q68DY1 528 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 BEND4Q6ZU67 534 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 ST8SIA2Q92186 375 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 TRAF4Q9BUZ4 470 aaPredicted RBP15.03■□□□□ -0
TCOF1-206ENST00000445265 SCO1O75880 301 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 OR7C1O76099 320 aaPredicted RBP15.03■□□□□ -0
TCOF1-206ENST00000445265 DBHP09172 617 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 ALOX5APP20292 161 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 AAED1Q7RTV5 226 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 NAXDQ8IW45 347 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 OR10R2Q8NGX6 335 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 PBOV1Q9GZY1 135 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 VAMP5O95183 116 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 IFNA17P01571 189 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 ZNF728P0DKX0 622 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 SERPINF1P36955 418 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 ZNF117Q03924 483 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 TCTEX1D2Q8WW35 142 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 PRSS27Q9BQR3 290 aa15.03■□□□□ -0
TCOF1-206ENST00000445265 SF3B6Q9Y3B4 125 aaKnown RBP15.03■□□□□ -0
TCOF1-206ENST00000445265 TOR1AO14656 332 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 CTAG2O75638 210 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 NME2P22392 152 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 MAGEB1P43366 347 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 SRYQ05066 204 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 C19orf48Q6RUI8 117 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 RABEPKQ7Z6M1 372 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 KMT5CQ86Y97 462 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 RELL2Q8NC24 303 aaPredicted RBP15.02■□□□□ -0
TCOF1-206ENST00000445265 OR1S1Q8NH92 325 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 NANOS1Q8WY41 292 aaKnown RBP15.02■□□□□ -0
TCOF1-206ENST00000445265 TSPAN32Q96QS1 320 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 ENKD1Q9H0I2 346 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 FAM60AQ9NP50 221 aa15.02■□□□□ -0
TCOF1-206ENST00000445265 SIRT4Q9Y6E7 314 aaPredicted RBP15.02■□□□□ -0
TCOF1-206ENST00000445265 C5orf67F2Z3F1 127 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 SSX5O60225 188 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 AQP8O94778 261 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 ACSM4P0C7M7 580 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 CXCL3P19876 107 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 SRPXP78539 464 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 MPPED2Q15777 294 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 ZAR1Q86SH2 424 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 DTWD2Q8NBA8 298 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 EDAQ92838 391 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 MRGPRX4Q96LA9 322 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 CNTNAP3Q9BZ76 1288 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 KCNIP1Q9NZI2 227 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 LMO7DNF2Z398 122 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 ATG12O94817 140 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 GSTP1P09211 210 aaKnown RBP15.02□□□□□ -0.01
TCOF1-206ENST00000445265 CNR1P21554 472 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 C10orf90Q96M02 699 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 MOGAT1Q96PD6 335 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 MRM2Q9UI43 246 aaKnown RBP15.02□□□□□ -0.01
TCOF1-206ENST00000445265 SCN3AQ9NY46 2000 aa15.02□□□□□ -0.01
TCOF1-206ENST00000445265 SIGLEC6O43699 453 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 LANCL1O43813 399 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 GMDSO60547 372 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PTP4A3O75365 173 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 MSR1P21757 451 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 HRH1P35367 487 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 EPHA4P54764 986 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 RIN1Q13671 783 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 OR1N1Q8NGS0 311 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PPP1R1CQ8WVI7 109 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 HSD17B8Q92506 261 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PIGTQ969N2 578 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 GPR84Q9NQS5 396 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ATG2BQ96BY7 2078 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 EML2O95834 649 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SNRNP70P08621 437 aaKnown RBP15.01□□□□□ -0.01
TCOF1-206ENST00000445265 QDPRP09417 244 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PPT1P50897 306 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 FZD2Q14332 565 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ZNF684Q5T5D7 378 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 NKX6-2Q9C056 277 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-206ENST00000445265 KLF15Q9UIH9 416 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 PCDHGA1Q9Y5H4 931 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 MYOFQ9NZM1 2061 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 CIB4A0PJX0 185 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 ATP6V1G2-DDX39BF2Z307 99 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 STMND1H3BQB6 276 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 K7EQS6 105 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 S100PP25815 95 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 CHATP28329 748 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 GALNT16Q8N428 558 aa15.01□□□□□ -0.01
TCOF1-206ENST00000445265 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-206ENST00000445265 MCTS1Q9ULC4 181 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms