RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 MVKQ03426 396 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 HFEQ30201 348 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 ZNF362Q5T0B9 420 aaPredicted RBP16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 CORO6Q6QEF8 472 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 DHFR2Q86XF0 187 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 LINC00471Q8N535 108 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 SDR9C7Q8NEX9 313 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 CMBLQ96DG6 245 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 COG8Q96MW5 612 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 COQ7Q99807 217 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 PLA2G12AQ9BZM1 189 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 FN3KQ9H479 309 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 VNN3Q9NY84 501 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 CDH10Q9Y6N8 788 aa16.03■□□□□ 0.16
HMGB3P22-201ENST00000442010 RNF212BA8MTL3 300 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 CLDN25C9JDP6 229 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 MSMBP08118 114 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 NOS3P29474 1203 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 GGT2P36268 569 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 CENPAP49450 140 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 PPP1R8Q12972 351 aaKnown RBP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 ZMAT1Q5H9K5 638 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 SLC18B1Q6NT16 456 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 RPL13AP3Q6NVV1 102 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 GLCCI1Q86VQ1 547 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 PHC2Q8IXK0 858 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 OR52E2Q8NGJ4 325 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 OR8D4Q8NGM9 314 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 PTP4A1Q93096 173 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 TMEM186Q96B77 213 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 EGLN1Q9GZT9 426 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 C1orf21Q9H246 121 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 ZNF665Q9H7R5 613 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 PNRC2Q9NPJ4 139 aaKnown RBP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 MRPL22Q9NWU5 206 aaKnown RBP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 FAM53CQ9NYF3 392 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 TAS2R1Q9NYW7 299 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 PRPF19Q9UMS4 504 aaKnown RBP16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 POLR1DQ9Y2S0 133 aa16.02■□□□□ 0.16
HMGB3P22-201ENST00000442010 DOCK11Q5JSL3 2073 aa16.02■□□□□ 0.15
HMGB3P22-201ENST00000442010 CCNB2O95067 398 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 RAC2P15153 192 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 RGS6P49758 472 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 HNRNPA0Q13151 305 aaKnown RBP16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 CLEC12AQ5QGZ9 265 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 SLC35F1Q5T1Q4 408 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 FBXW12Q6X9E4 464 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 CFAP77Q6ZQR2 320 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 COLCA1Q6ZS62 124 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 RASSF6Q6ZTQ3 369 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 ZNRF4Q8WWF5 429 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 TMEM158Q8WZ71 300 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 CCL17Q92583 94 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 HIF1ANQ9NWT6 349 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 CYB5R1Q9UHQ9 305 aa16.01■□□□□ 0.15
HMGB3P22-201ENST00000442010 ACOT8O14734 319 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 IGHV2-5P01817 119 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 PCMT1P22061 227 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 TNFAIP6P98066 277 aaPredicted RBP16■□□□□ 0.15
HMGB3P22-201ENST00000442010 HLXQ14774 488 aaPredicted RBP16■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR2T5Q6IEZ7 315 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 LINC00346Q8IVM7 164 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR2T29Q8NH02 315 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR51F2Q8NH61 342 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 RAB1CQ92928 201 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 APOBEC3DQ96AK3 386 aaPredicted RBP16■□□□□ 0.15
HMGB3P22-201ENST00000442010 ASB9Q96DX5 294 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 CLPTM1LQ96KA5 538 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 LPAR2Q9HBW0 351 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 DCAF16Q9NXF7 216 aa16■□□□□ 0.15
HMGB3P22-201ENST00000442010 MICAQ29983 383 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 KRTAP24-1Q3LI83 254 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 SLC36A3Q495N2 470 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 LNX2Q8N448 690 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 CYB561A3Q8NBI2 242 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 AQP11Q8NBQ7 271 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR52L1Q8NGH7 329 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 POP5Q969H6 163 aaKnown RBP15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 TIMD4Q96H15 378 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 C1QTNF5Q9BXJ0 243 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 DGCR6LQ9BY27 220 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 G6PC2Q9NQR9 355 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 PTTG3PQ9NZH4 202 aa15.99■□□□□ 0.15
HMGB3P22-201ENST00000442010 TRAV20A0A0B4J274 112 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 ACSM4P0C7M7 580 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 PSKH1P11801 424 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 RBMXP38159 391 aaKnown RBP15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 SLC3A1Q07837 685 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 FAM98BQ52LJ0 330 aaKnown RBP15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 ACSM5Q6NUN0 579 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 ZNF283Q8N7M2 679 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 SLC37A3Q8NCC5 494 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR2Z1Q8NG97 314 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR5L1Q8NGL2 311 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 OR4Q3Q8NH05 313 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 RAB39BQ96DA2 213 aa15.98■□□□□ 0.15
HMGB3P22-201ENST00000442010 MAP6Q96JE9 813 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms