RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 ROPN1BQ9BZX4 212 aaPredicted RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 PPA2Q9H2U2 334 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 POFUT1Q9H488 388 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 ROPN1Q9HAT0 212 aaPredicted RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 RAB18Q9NP72 206 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
NELFE-204ENST00000436289 CORO2BQ9UQ03 480 aa12.35□□□□□ -0.43
NELFE-204ENST00000436289 IGKV1D-43A0A0B4J1Z2 117 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 LOC100653049A0A140TA62 436 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 WDR91A4D1P6 747 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 KPNA4O00629 521 aaPredicted RBP12.34□□□□□ -0.43
NELFE-204ENST00000436289 HDAC3O15379 428 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 SGCEO43556 437 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 KRT34O76011 436 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 PAHP00439 452 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 MT-ND1P03886 318 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 TSPAN19P0C672 248 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 PMELP40967 661 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 AQP2P41181 271 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 FMODQ06828 376 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
NELFE-204ENST00000436289 STX3Q13277 289 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 DEFB121Q5J5C9 76 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 FAM201AQ5SY85 155 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 OR5AS1Q8N127 324 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 WFDC6Q9BQY6 131 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 WDR55Q9H6Y2 383 aaPredicted RBP12.34□□□□□ -0.43
NELFE-204ENST00000436289 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 SLC7A7Q9UM01 511 aa12.34□□□□□ -0.43
NELFE-204ENST00000436289 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 HTR3EA5X5Y0 456 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 CPSF4LA6NMK7 179 aaKnown RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 IQCF6A8MYZ5 107 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 F5H5P2 479 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 LGALS8O00214 317 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 FBP2O00757 339 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 DOK2O60496 412 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 LYPD3O95274 346 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 RBM34P42696 430 aaKnown RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 CD69Q07108 199 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 ENDOGQ14249 297 aaKnown RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 INTS11Q5TA45 600 aaKnown RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 CALHM3Q86XJ0 350 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 CMTM4Q8IZR5 234 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 KLHDC1Q8N7A1 406 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 OR6T1Q8NGN1 323 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 MEPEQ9NQ76 525 aaPredicted RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 POLE4Q9NR33 117 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 ATPIF1Q9UII2 106 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
NELFE-204ENST00000436289 NOP16Q9Y3C1 178 aaKnown RBP12.33□□□□□ -0.44
NELFE-204ENST00000436289 A6NIZ1 184 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 K7EIL1 84 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 M0R3H8 397 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
NELFE-204ENST00000436289 MLNRO43193 412 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 ADAM20O43506 726 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 OR7A10O76100 309 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 GPX2P18283 190 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 FPR3P25089 353 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 RAP1BP61224 184 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 RPL27P61353 136 aaKnown RBP12.32□□□□□ -0.44
NELFE-204ENST00000436289 RAP1AP62834 184 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 COL10A1Q03692 680 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 DCTN2Q13561 401 aaKnown RBP12.32□□□□□ -0.44
NELFE-204ENST00000436289 LRIF1Q5T3J3 769 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 SGTBQ96EQ0 304 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 CLPTM1LQ96KA5 538 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 C16orf45Q96MC5 204 aaPredicted RBP12.32□□□□□ -0.44
NELFE-204ENST00000436289 HCAR1Q9BXC0 346 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 CTSZQ9UBR2 303 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 MAB21L2Q9Y586 359 aa12.32□□□□□ -0.44
NELFE-204ENST00000436289 A0A1W2PPL8 197 aa12.31□□□□□ -0.44
NELFE-204ENST00000436289 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
NELFE-204ENST00000436289 PPP1R3DO95685 299 aa12.31□□□□□ -0.44
NELFE-204ENST00000436289 THY1P04216 161 aa12.31□□□□□ -0.44
NELFE-204ENST00000436289 FAHP16930 419 aa12.31□□□□□ -0.44
NELFE-204ENST00000436289 HOXB9P17482 250 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms