RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR1J2Q8NGS2 313 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TRMT10AQ8TBZ6 339 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PAQR8Q8TEZ7 354 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 HAS2Q92819 552 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 EMG1Q92979 244 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MCHR2Q969V1 340 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 C8orf44Q96CB5 159 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LGALS12Q96DT0 336 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TM4SF19Q96DZ7 209 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MTERF3Q96E29 417 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 AURKBQ96GD4 344 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 BBC3Q96PG8 261 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RBP7Q96R05 134 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SIGLEC11Q96RL6 698 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MTERF1Q99551 399 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MRPL57Q9BQC6 102 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 COPS4Q9BT78 406 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TMED9Q9BVK6 235 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 UGT2B28Q9BY64 529 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 NLNQ9BYT8 704 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SEMA4CQ9C0C4 833 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 WWTR1Q9GZV5 400 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 DPAGT1Q9H3H5 408 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 KLHL31Q9H511 634 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 DUSP21Q9H596 190 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RNF121Q9H920 327 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 C3orf14Q9HBI5 128 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 CDH20Q9HBT6 801 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 NIT2Q9NQR4 276 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MBNL3Q9NUK0 354 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 METTL1Q9UBP6 276 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 DCDC2Q9UHG0 476 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 NUFIP1Q9UHK0 495 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SCP2D1Q9UJQ7 156 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PCTPQ9UKL6 214 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 FOXJ3Q9UPW0 622 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 FARSAQ9Y285 508 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MDC1Q14676 2089 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SEC16AO15027 2179 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 KCNE1BA0A087WTH5 132 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 G3V2L1 256 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 BLOC1S5-TXNDC5H3BN57 136 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 FOXE1O00358 373 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 OR7A17O14581 309 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ERI3O43414 337 aaKnown RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PLIN3O60664 434 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 GALR3O60755 368 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ANGPTL1O95841 491 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PLA2G1BP04054 148 aaKnown RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 RLN2P04090 185 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 SERPINE1P05121 402 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 GPIP06744 558 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CELA2AP08217 269 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NDUFB7P17568 137 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 SRMP19623 302 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 DPP4P27487 766 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CERS1P27544 350 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 GTF2E2P29084 291 aaKnown RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 TGFBR2P37173 567 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PMELP40967 661 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CRATP43155 626 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 XCR1P46094 333 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 RBP2P50120 134 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CCL11P51671 97 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PKNOX1P55347 436 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 RRAS2P62070 204 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PSG6Q00889 435 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 DHODHQ02127 395 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF155Q12901 538 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 EXOSC2Q13868 293 aaKnown RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NDUFA9Q16795 377 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 LINC00303Q3SY05 128 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 UNC50Q53HI1 259 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 LIPNQ5VXI9 398 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NSUN5P2Q63ZY6 315 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 LCN8Q6JVE9 175 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 RPL13AP3Q6NVV1 102 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CBLN3Q6UW01 205 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 LANCL3Q6ZV70 420 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 LINGO2Q7L985 606 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 GDF7Q7Z4P5 450 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ARRDC1Q8N5I2 433 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 WDSUB1Q8N9V3 476 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 OR2Y1Q8NGV0 311 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF596Q8TC21 504 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NT5CQ8TCD5 201 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ADAMTS17Q8TE56 1095 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 TSLPQ969D9 159 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 PRRC1Q96M27 445 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF385AQ96PM9 386 aaKnown RBP4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NEDD4LQ96PU5 975 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 F2RL3Q96RI0 385 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 KCNA7Q96RP8 456 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 NODALQ96S42 347 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 HBEGFQ99075 208 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 CHRDL1Q9BU40 450 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 EFCAB11Q9BUY7 163 aa4.05□□□□□ -1.76
SF3B1-202ENST00000409915 C1QTNF3Q9BXJ4 246 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms