RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CCDC107Q8WV48 283 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 GPX7Q96SL4 187 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-203ENST00000397763 HRH4Q9H3N8 390 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 EPHA6Q9UF33 1036 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 MKL2Q9ULH7 1088 aa12.34□□□□□ -0.43
COL6A2-203ENST00000397763 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
COL6A2-203ENST00000397763 A0A0D9SG52 128 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PMS2P2O95744 297 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PMP2P02689 132 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 IL13RA1P78552 427 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 DNM1P46Q6ZS02 220 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 TRAPPC6BQ86SZ2 158 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 SFT2D1Q8WV19 159 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 TGM7Q96PF1 710 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 METTL12A8MUP2 240 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 BCL2L11O43521 198 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 EIF4E2O60573 245 aaKnown RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 EIF3GO75821 320 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF735P0CB33 412 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PNMTP11086 282 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 C11orf87Q6NUJ2 197 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PAPD4Q6PIY7 484 aaKnown RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 RTL10Q7L3V2 364 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF679Q8IYX0 411 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 RXFP4Q8TDU9 374 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ZC3H10Q96K80 434 aaKnown RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 CKLFQ9UBR5 152 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 TCRBV21S2A2A0A5A6 115 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 CLPSP04118 112 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 SLC2A1P11166 492 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 PGAM2P15259 253 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 HRH1P35367 487 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ACTBP60709 375 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 ACTG1P63261 375 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 OR5M8Q8NGP6 311 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 C15orf40Q8WUR7 153 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 HOXB13Q92826 284 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-203ENST00000397763 FGGYQ96C11 551 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 MRI1Q9BV20 369 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 FOXQ1Q9C009 403 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 GAREM1Q9H706 876 aa12.33□□□□□ -0.44
COL6A2-203ENST00000397763 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 LOC107986453A0A1B0GWG9 222 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 ERCC1P07992 297 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-203ENST00000397763 CD96P40200 585 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 KCNRGQ8N5I3 272 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 LINC00469Q8N7U9 141 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 NUDT22Q9BRQ3 303 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 EMC6Q9BV81 110 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-203ENST00000397763 FREM2Q5SZK8 3169 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 PRSS37A4D1T9 235 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 TNFP01375 233 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 CD2P06729 351 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 CASRP41180 1078 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 EGR3Q06889 387 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
COL6A2-203ENST00000397763 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-203ENST00000397763 DCXRQ7Z4W1 244 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 OR1M1Q8NGA1 313 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-203ENST00000397763 PMM1Q92871 262 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 MRGPRFQ96AM1 343 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 MED29Q9NX70 200 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 TNFSF18Q9UNG2 199 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 SLC5A6Q9Y289 635 aa12.32□□□□□ -0.44
COL6A2-203ENST00000397763 RFC3P40938 356 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 RIDAP52758 137 aaKnown RBP12.31□□□□□ -0.44
COL6A2-203ENST00000397763 VWA2Q5GFL6 755 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 MAFIPQ8WZ33 124 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 ZNF587Q96SQ5 575 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-203ENST00000397763 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-203ENST00000397763 CYP8B1Q9UNU6 501 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 TMEM14AQ9Y6G1 99 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 IGHV3-20A0A0C4DH32 117 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 SNAPC5O75971 98 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 FUT7Q11130 342 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 TGIF1Q15583 401 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 SLC9A3R2Q15599 337 aa12.31□□□□□ -0.44
COL6A2-203ENST00000397763 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms