RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MS4A6EQ96DS6 147 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 ULBP2Q9BZM5 246 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 PADI1Q9ULC6 663 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 CDKN3Q16667 212 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 SCMH1Q96GD3 660 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 LYRM4Q9HD34 91 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 SLC17A5Q9NRA2 495 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 A4GNTQ9UNA3 340 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 RPA2P15927 270 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 PCBP4P57723 403 aaKnown RBP17.94■□□□□ 0.46
SHANK1-203ENST00000391813 FABP9Q0Z7S8 132 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 FXNQ16595 210 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 OR5AP2Q8NGF4 316 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 NUP205Q92621 2012 aa17.94■□□□□ 0.46
SHANK1-203ENST00000391813 TMED7-TICAM2A0A0A6YYA0 188 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF727A8MUV8 499 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 CCR5P51681 352 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 RPL27P61353 136 aaKnown RBP17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF626Q68DY1 528 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 MOB3CQ70IA8 216 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF610Q8N9Z0 462 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 TMED7Q9Y3B3 224 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 A0A1W2PR48 441 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF98A6NK75 572 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 SCGB2A1O75556 95 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 RNF4P78317 190 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 IL10RAQ13651 578 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 DCXRQ7Z4W1 244 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 KIRREL1Q96J84 757 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 STARD5Q9NSY2 213 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 MTFP1Q9UDX5 166 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ETHE1O95571 254 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 PVRP15151 417 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 RANP62826 216 aaKnown RBP17.93■□□□□ 0.46
SHANK1-203ENST00000391813 TMEM128Q5BJH2 165 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 LILRA6Q6PI73 481 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 DBX2Q6ZNG2 339 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 MMP21Q8N119 569 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 DTWD2Q8NBA8 298 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 TSLPQ969D9 159 aa17.93■□□□□ 0.46
SHANK1-203ENST00000391813 ARGFXA6NJG6 315 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SLC17A2O00624 439 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 CYB5BO43169 146 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 HCRTR1O43613 425 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 ITGB8P26012 769 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 LRRTM1Q86UE6 522 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 DND1Q8IYX4 353 aaKnown RBP17.92■□□□□ 0.46
SHANK1-203ENST00000391813 PIGCQ92535 297 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 CXorf51AA0A1B0GTR3 108 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 OR6C68A6NDL8 312 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 ACTL6BO94805 426 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 GLSO94925 669 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-203ENST00000391813 GABRA1P14867 456 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 GABREP78334 506 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 LINC00346Q8IVM7 164 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SPNS2Q8IVW8 549 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 FAM58AQ8N1B3 248 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SIRT6Q8N6T7 355 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 TCTN2Q96GX1 697 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 AKR1E2Q96JD6 320 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 PLA2G12AQ9BZM1 189 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SCN4AP35499 1836 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SULT1A3P0DMM9 295 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 SULT1A4P0DMN0 295 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 HAGHQ16775 308 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 ZNF684Q5T5D7 378 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 ARRDC1Q8N5I2 433 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 ZDHHC22Q8N966 263 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 JAM3Q9BX67 310 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 MOB1AQ9H8S9 216 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 FCMRO60667 390 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 CBX7O95931 251 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 GSTP1P09211 210 aaKnown RBP17.92■□□□□ 0.46
SHANK1-203ENST00000391813 DVL1P1P54792 670 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-203ENST00000391813 TVP23CQ96ET8 276 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 KLF15Q9UIH9 416 aa17.92■□□□□ 0.46
SHANK1-203ENST00000391813 CLDN1O95832 211 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 PHLDA2Q53GA4 152 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 MED25Q71SY5 747 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 OR2G2Q8NGZ5 317 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 LCORQ96JN0 433 aaPredicted RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 MED9Q9NWA0 146 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 TMEM202A6NGA9 273 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 PLA2G10O15496 165 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 UTS2O95399 124 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 OR14A16Q8NHC5 309 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 PLK3Q9H4B4 646 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 ELF5Q9UKW6 265 aaPredicted RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 POMT1Q9Y6A1 747 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 C2CD4DB7Z1M9 353 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 CTNSO60931 367 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 CST4P01036 141 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 IL2RGP31785 369 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 BSGP35613 385 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 WNT3P56703 355 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 GRB2P62993 217 aaKnown RBP17.91■□□□□ 0.46
SHANK1-203ENST00000391813 DOK3Q7L591 496 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 FAM185AQ8N0U4 392 aa17.91■□□□□ 0.46
SHANK1-203ENST00000391813 MARCH1Q8TCQ1 289 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms