RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SCGNO76038 276 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 ERCC1P07992 297 aaPredicted RBP12.47□□□□□ -0.41
USF1-202ENST00000368020 LIFP15018 202 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 ACTBP60709 375 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 ACTG1P63261 375 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 IFITM2Q01629 132 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 POU4F3Q15319 338 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 PRAMEF20Q5VT98 475 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 GPAT4Q86UL3 456 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 LINC00346Q8IVM7 164 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 ELMOD2Q8IZ81 293 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 OR51D1Q8NGF3 324 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 MED30Q96HR3 178 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SPRY4Q9C004 299 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 SH2D2AQ9NP31 389 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 CENPMQ9NSP4 180 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 DLL3Q9NYJ7 618 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 DKKL1Q9UK85 242 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 FBXL3Q9UKT7 428 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 PADI1Q9ULC6 663 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 HRH3Q9Y5N1 445 aa12.47□□□□□ -0.41
USF1-202ENST00000368020 A0A1B0GUH1 482 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 SNAPC5O75971 98 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 RAB6AP20340 208 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 PSMA6P60900 246 aaKnown RBP12.46□□□□□ -0.41
USF1-202ENST00000368020 CHAF1BQ13112 559 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 C2orf76Q3KRA6 126 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 IGF2-ASQ6U949 168 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 ADGRE4PQ86SQ3 457 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 PNPLA2Q96AD5 504 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 FAM122AQ96E09 287 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 PIGQQ9BRB3 760 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 UTP23Q9BRU9 249 aaKnown RBP12.46□□□□□ -0.41
USF1-202ENST00000368020 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 BEX2Q9BXY8 128 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 CDCP1Q9H5V8 836 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 SCPEP1Q9HB40 452 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 GPN1Q9HCN4 374 aaPredicted RBP12.46□□□□□ -0.41
USF1-202ENST00000368020 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 ZNF107Q9UII5 783 aaPredicted RBP12.46□□□□□ -0.41
USF1-202ENST00000368020 CFAP54Q96N23 3096 aa12.46□□□□□ -0.41
USF1-202ENST00000368020 EML6Q6ZMW3 1958 aa12.46□□□□□ -0.42
USF1-202ENST00000368020 SPTBN4Q9H254 2564 aa12.46□□□□□ -0.42
USF1-202ENST00000368020 IGKV1D-43A0A0B4J1Z2 117 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 A0A1W2PNR3 127 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 HPP00738 406 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 GABRA1P14867 456 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 S100A1P23297 94 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 HSD11B1P28845 292 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 SFTPDP35247 375 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 CCR6P51684 374 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 GRB2P62993 217 aaKnown RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 GABREP78334 506 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 H3F3AP84243 136 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.421e-7■■■■□ 25.6
USF1-202ENST00000368020 RAB12Q6IQ22 244 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 TMEM246Q9BRR3 403 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 TMEM185BQ9H7F4 350 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 TAS2R4Q9NYW5 299 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 C9orf172C9J069 976 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 H0YC42 278 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 STK17BO94768 372 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 WNT11O96014 354 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 PRSS3P35030 304 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 PLA2G5P39877 138 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 RAC1P63000 192 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 CAMK2DQ13557 499 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 SSPNQ14714 243 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 TAF13Q15543 124 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 GLYATL3Q5SZD4 288 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 RAET1LQ5VY80 246 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 C6orf15Q6UXA7 325 aaPredicted RBP12.45□□□□□ -0.42
USF1-202ENST00000368020 MDGA2Q7Z553 956 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 CDH26Q8IXH8 852 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 PBOV1Q9GZY1 135 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 ZNF160Q9HCG1 818 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 KLK11Q9UBX7 282 aa12.45□□□□□ -0.42
USF1-202ENST00000368020 TMEM272A0A1B0GTI8 110 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 METTL21EPA6NDL7 271 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 SYT7O43581 403 aa12.44□□□□□ -0.42
USF1-202ENST00000368020 P04436 131 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms