RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TMEM164Q5U3C3 297 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 B3GNTL1Q67FW5 361 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 OLFML2AQ68BL7 652 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 LIX1LQ8IVB5 337 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 ESX1Q8N693 406 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 PLPP7Q8NBV4 271 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 OR6N1Q8NGY5 312 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 OR56B4Q8NH76 319 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CAPSLQ8WWF8 208 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 GCDHQ92947 438 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 INTS12Q96CB8 462 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 RNF170Q96K19 258 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 BEX2Q9BXY8 128 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 GHITMQ9H3K2 345 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MCUBQ9NWR8 336 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 KLK11Q9UBX7 282 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 ITGB1BP2Q9UKP3 347 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MUC6Q6W4X9 2439 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 A0A0J9YW62 118 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 LOC390937A0A1W2PQ73 354 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 DOK2O60496 412 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 GUCA1AP43080 201 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 EFNB2P52799 333 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 NUBP1P53384 320 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 B3GALT5-AS1P59052 145 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 EIF3IQ13347 325 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MAB21L1Q13394 359 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 C10orf128Q5T292 105 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 LUZP2Q86TE4 346 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 OR9K2Q8NGE7 335 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 CDC6Q99741 560 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 TRAF4Q9BUZ4 470 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 GPR87Q9BY21 358 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MED28Q9H204 178 aa14.8□□□□□ -0.04
SAMM50-201ENST00000350028 TP63Q9H3D4 680 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MRPL15Q9P015 296 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 MRPS18CQ9Y3D5 142 aaKnown RBP14.8□□□□□ -0.04
SAMM50-201ENST00000350028 TMEM272A0A1B0GTI8 110 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 LOC101059948A0A1B0GTJ6 334 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 SYT7O43581 403 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 RBBP9O75884 186 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 MT-CO3P00414 261 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 GLYATL3Q5SZD4 288 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 FOXL2NBQ6ZUU3 175 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 PNPLA2Q96AD5 504 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 FGGYQ96C11 551 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 SF3B5Q9BWJ5 86 aaKnown RBP14.79□□□□□ -0.04
SAMM50-201ENST00000350028 TAS2R8Q9NYW2 309 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 ASH2LQ9UBL3 628 aa14.79□□□□□ -0.04
SAMM50-201ENST00000350028 A0A1B0GVI7 797 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 CIB4A0PJX0 185 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 C21orf140B9A014 251 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 H7C417 338 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 GMDSO60547 372 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 PSMB1P20618 241 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 STOMP27105 288 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 ERP29P30040 261 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 CYB561P49447 251 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SUCLG1P53597 346 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 RAC3P60763 192 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 GRB2P62993 217 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 IFITM2Q01629 132 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SPOCK1Q08629 439 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 CD276Q5ZPR3 534 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SFRP4Q6FHJ7 346 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 JMJD6Q6NYC1 403 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 BEST3Q8N1M1 668 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 OR51A2Q8NGJ7 313 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 OR14L1PQ8NHC6 308 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 PTX4Q96A99 478 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 FAM210AQ96ND0 272 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 FAM117AQ9C073 453 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 ATG5Q9H1Y0 275 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 OR51J1Q9H342 316 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 EMC3Q9P0I2 261 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 MTFP1Q9UDX5 166 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 TRAV18A0A075B6X5 111 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 A0A0A6YYH2 397 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 DCDC2BA2VCK2 349 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 FAM172BPA6NC97 362 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 A6NJ64 397 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 TNFSF11O14788 317 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 LMX1BO60663 402 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 C1QBP02746 253 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 PTHLHP12272 177 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 GABRA1P14867 456 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 MSR1P21757 451 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 BDKRB2P30411 391 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 CLDN6P56747 220 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SGCAQ16586 387 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 GSG1Q2KHT4 349 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 LYPD6Q86Y78 171 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 TMEM123Q8N131 208 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 JAGN1Q8N5M9 183 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SUMF1Q8NBK3 374 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 PSMF1Q92530 271 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 ZNF385AQ96PM9 386 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 SORCS2Q96PQ0 1159 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 UCN2Q96RP3 112 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 PNRC2Q9NPJ4 139 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms