RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 DAPP51397 102 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 CRISP1P54107 249 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 MBNL2Q5VZF2 373 aaKnown RBP16.45■□□□□ 0.22
SYNE4-202ENST00000340477 DNM1P46Q6ZS02 220 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 KLF14Q8TD94 323 aaPredicted RBP16.45■□□□□ 0.22
SYNE4-202ENST00000340477 MARS2Q96GW9 593 aaKnown RBP16.45■□□□□ 0.22
SYNE4-202ENST00000340477 OSBPL10Q9BXB5 764 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 SEMA6AQ9H2E6 1030 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 CYSLTR2Q9NS75 346 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF469Q96JG9 3925 aaPredicted RBP16.45■□□□□ 0.22
SYNE4-202ENST00000340477 RTTNQ86VV8 2226 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 IGHV4-30-2A0A087WSY4 118 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 FAM183AA6NL82 134 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 SURF4O15260 269 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 NGFP01138 241 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 NAT2P11245 290 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 IGFBP5P24593 272 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 LIPAP38571 399 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 RPS7P62081 194 aaKnown RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 CDK5Q00535 292 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 DBPQ10586 325 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 TAF13Q15543 124 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 SNAPC1Q16533 368 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 PCGF3Q3KNV8 242 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 ALKBH6Q3KRA9 238 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 ACSM5Q6NUN0 579 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 PLBD1Q6P4A8 553 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 CFAP77Q6ZQR2 320 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 ZCCHC24Q8N2G6 241 aaKnown RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 CIARTQ8N365 385 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF540Q8NDQ6 660 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 C10orf105Q8TEF2 133 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 SLC7A6Q92536 515 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 SPTSSAQ969W0 71 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 APOBEC3DQ96AK3 386 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 INTS14Q96SY0 518 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 OR51V1Q9H2C8 321 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 MED20Q9H944 212 aa16.44■□□□□ 0.22
SYNE4-202ENST00000340477 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.44■□□□□ 0.22
SYNE4-202ENST00000340477 C17orf100A8MU93 164 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 PRODHO43272 600 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 TPD52L2O43399 206 aaKnown RBP16.43■□□□□ 0.22
SYNE4-202ENST00000340477 TIMM8AO60220 97 aaPredicted RBP16.43■□□□□ 0.22
SYNE4-202ENST00000340477 GLCEO94923 617 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 CLUP10909 449 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 GSTT1P30711 240 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 TPTEP56180 551 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 KLHL12Q53G59 568 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 CLEC9AQ6UXN8 241 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 ERI1Q8IV48 349 aaKnown RBP16.43■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF511Q8NB15 262 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 UBASH3BQ8TF42 649 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 COPS4Q9BT78 406 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 OAZ3Q9UMX2 235 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 ORC6Q9Y5N6 252 aa16.43■□□□□ 0.22
SYNE4-202ENST00000340477 SAC3D1A6NKF1 404 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 F5H5K5 113 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF593O00488 134 aaPredicted RBP16.42■□□□□ 0.22
SYNE4-202ENST00000340477 DBHP09172 617 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 MPV17P39210 176 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF81P51508 661 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 TEX30Q5JUR7 227 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 TMEM236Q5W0B7 351 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 KDM4DQ6B0I6 523 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 LYPD4Q6UWN0 246 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 CXXC5Q7LFL8 322 aaKnown RBP16.42■□□□□ 0.22
SYNE4-202ENST00000340477 SHFQ7M4L6 423 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 DCXRQ7Z4W1 244 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 OR6N2Q8NGY6 317 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 RBM4BQ9BQ04 359 aaKnown RBP16.42■□□□□ 0.22
SYNE4-202ENST00000340477 WDR76Q9H967 626 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 DECR2Q9NUI1 292 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 TVP23BQ9NYZ1 205 aa16.42■□□□□ 0.22
SYNE4-202ENST00000340477 CHD3Q12873 2000 aaKnown RBP16.41■□□□□ 0.22
SYNE4-202ENST00000340477 SLC15A1P46059 708 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 SLC6A9P48067 706 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 MALLQ13021 153 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 PTGES3Q15185 160 aaKnown RBP16.41■□□□□ 0.22
SYNE4-202ENST00000340477 SLC35D3Q5M8T2 416 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 LCN1P1Q5VSP4 162 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 CPOQ8IVL8 374 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 ZNRF4Q8WWF5 429 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 PTP4A1Q93096 173 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 MAP6Q96JE9 813 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 HCAR1Q9BXC0 346 aa16.41■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF878C9JN71 531 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 M0R135 149 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 MITFO75030 526 aaPredicted RBP16.4■□□□□ 0.22
SYNE4-202ENST00000340477 LCATP04180 440 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 RPS27P42677 84 aaKnown RBP16.4■□□□□ 0.22
SYNE4-202ENST00000340477 EIF2B1Q14232 305 aaKnown RBP16.4■□□□□ 0.22
SYNE4-202ENST00000340477 FAM209AQ5JX71 171 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 LINC01590Q5TEZ4 76 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF786Q8N393 782 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 RDH5Q92781 318 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 STMN2Q93045 179 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 SLAMF6Q96DU3 332 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 ZMYND19Q96E35 227 aaPredicted RBP16.4■□□□□ 0.22
SYNE4-202ENST00000340477 ZNF799Q96GE5 643 aa16.4■□□□□ 0.22
SYNE4-202ENST00000340477 DIRC2Q96SL1 478 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms