RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HTR2CP28335 458 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CLDN6P56747 220 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 SULF2Q8IWU5 870 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 FAM160A2Q8N612 972 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CCDC71LQ8N9Z2 235 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 SLC37A2Q8TED4 501 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 NEU3Q9UQ49 428 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 TAF1LQ8IZX4 1826 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 TRBV11-1A0A0K0K1C0 115 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 LINC01553A4QN01 128 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 VSTM5A8MXK1 200 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF354AO60765 605 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 ZFAND5O76080 213 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 DBHP09172 617 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 IL34Q6ZMJ4 242 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 OR1J2Q8NGS2 313 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 FAM213BQ8TBF2 198 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 CPNE4Q96A23 557 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 WDR76Q9H967 626 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 GJE1A6NN92 205 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 FFAR1O14842 300 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 F10P00742 488 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 DPTQ07507 201 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 TMEM176BQ3YBM2 270 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF610Q8N9Z0 462 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 OR56B1Q8NGI3 324 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 SLC6A18Q96N87 628 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 HINT2Q9BX68 163 aa14.62□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF230Q9UIE0 474 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-201ENST00000337331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 A0A1W2PS29 197 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 OR6C76A6NM76 312 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 BHLHE40O14503 412 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 PPM1DO15297 605 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 SELENOFO60613 162 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 LCORQ96JN0 433 aaPredicted RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ASB16Q96NS5 453 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ULBP3Q9BZM4 244 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 EHFQ9NZC4 300 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 BLACEA4D250 179 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 FGF7P21781 194 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 TRHRP34981 398 aaPredicted RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 CSNK1EP49674 416 aaKnown RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ELFN2Q5R3F8 820 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ABHD17BQ5VST6 288 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 LIPNQ5VXI9 398 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 LINC00346Q8IVM7 164 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF695Q8IW36 515 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 OR13H1Q8NG92 308 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 OR5D18Q8NGL1 313 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 PATE1Q8WXA2 126 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 PHYHIPLQ96FC7 376 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 CCDC74BQ96LY2 380 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 SPIN2AQ99865 258 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 SPIN2BQ9BPZ2 258 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 EXOSC3Q9NQT5 275 aaKnown RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 EMC9Q9Y3B6 208 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 AUP1Q9Y679 476 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 SPTBP11277 2137 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 KCNAB3O43448 404 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 UTS2O95399 124 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 THBS1P07996 1170 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 RPL29P47914 159 aaKnown RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 PKIAP61925 76 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 GPNMBQ14956 572 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 OVCH1Q7RTY7 1134 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 GALNT16Q8N428 558 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 KDF1Q8NAX2 398 aaPredicted RBP14.61□□□□□ -0.07
NPHP3-201ENST00000337331 RCBTB1Q8NDN9 531 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 OR5T1Q8NG75 326 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 VPS25Q9BRG1 176 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 ULBP2Q9BZM5 246 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 C1orf198Q9H425 327 aa14.61□□□□□ -0.07
NPHP3-201ENST00000337331 FITM1A5D6W6 292 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 SERPINE2P07093 398 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 ZNF239Q16600 458 aaKnown RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 LPAL2Q16609 132 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 MRPL21Q7Z2W9 205 aaKnown RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 LIMS2Q7Z4I7 341 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 CMTM1Q8IZ96 169 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 PRR18Q8N4B5 295 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 HSD17B11Q8NBQ5 300 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 VN1R3Q9BXE9 311 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 OR10A2Q9H208 303 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 FGF21Q9NSA1 209 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 LRFN1Q9P244 771 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 C19orf53Q9UNZ5 99 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 AHCTF1Q8WYP5 2266 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 A0A1W2PPE2 198 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 WISP3O95389 354 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 MYOGP15173 224 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 DHRS7BQ6IAN0 325 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-201ENST00000337331 FAM57BQ71RH2 274 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 TRAPPC6BQ86SZ2 158 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 OR5M8Q8NGP6 311 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 CKAP5Q14008 2032 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 SURF4O15260 269 aa14.6□□□□□ -0.07
NPHP3-201ENST00000337331 BSGP35613 385 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms