RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PPIAL4DF5H284 164 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 RENP00797 406 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 PPIAL4FP0DN26 164 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 MSX2P35548 267 aaPredicted RBP15□□□□□ -0.01
HDDC3-201ENST00000330334 TSPAN31Q12999 210 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 KRTAP27-1Q3LI81 207 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 SPRNQ5BIV9 151 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 SLC27A4Q6P1M0 643 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 LEG1Q6P5S2 330 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 SHQ1Q6PI26 577 aaKnown RBP15□□□□□ -0.01
HDDC3-201ENST00000330334 COLCA1Q6ZS62 124 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 C1orf229Q6ZS94 237 aaPredicted RBP15□□□□□ -0.01
HDDC3-201ENST00000330334 JAZF1Q86VZ6 243 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 LINC00471Q8N535 108 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 SLC26A10Q8NG04 563 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 GNPDA2Q8TDQ7 276 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 SLC7A6Q92536 515 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 APOBEC3DQ96AK3 386 aaPredicted RBP15□□□□□ -0.01
HDDC3-201ENST00000330334 NMNAT3Q96T66 252 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 GAL3ST1Q99999 423 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 TMEM106BQ9NUM4 274 aa15□□□□□ -0.01
HDDC3-201ENST00000330334 IFNL4K9M1U5 179 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 IGHV2-70P01814 119 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 DBHP09172 617 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 HIST1H1CP16403 213 aaKnown RBP14.99□□□□□ -0.01
HDDC3-201ENST00000330334 RRM2P31350 389 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 GNGT1P63211 74 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 SRSF2Q01130 221 aaKnown RBP14.99□□□□□ -0.01
HDDC3-201ENST00000330334 ECH1Q13011 328 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 RSPO1Q2MKA7 263 aaPredicted RBP14.99□□□□□ -0.01
HDDC3-201ENST00000330334 SLC36A3Q495N2 470 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 OTPQ5XKR4 325 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 ZNF620Q6ZNG0 422 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 USP43Q70EL4 1123 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 ZDHHC21Q8IVQ6 265 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 DEFB107AQ8IZN7 70 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 OR2Z1Q8NG97 314 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 IFT27Q9BW83 186 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 TMPRSS13Q9BYE2 586 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 TRIM15Q9C019 465 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 SRA1Q9HD15 236 aaKnown RBP14.99□□□□□ -0.01
HDDC3-201ENST00000330334 ACTR3BQ9P1U1 418 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 POLR1DQ9Y2S0 133 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 ANK2Q01484 3957 aa14.99□□□□□ -0.01
HDDC3-201ENST00000330334 AVPP01185 164 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 CPT2P23786 658 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 NOS3P29474 1203 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 CENPAP49450 140 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 TMEM155Q4W5P6 130 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 RPL13AP3Q6NVV1 102 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 PGBD2Q6P3X8 592 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 LRRC28Q86X40 367 aaPredicted RBP14.98□□□□□ -0.01
HDDC3-201ENST00000330334 ARHGAP24Q8N264 748 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 OR8G5Q8NG78 346 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 OR13G1Q8NGZ3 307 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 OR4K13Q8NH42 304 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 OCEL1Q9H607 264 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 CYB5R1Q9UHQ9 305 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 KCNG2Q9UJ96 466 aa14.98□□□□□ -0.01
HDDC3-201ENST00000330334 POLR3KQ9Y2Y1 108 aaPredicted RBP14.98□□□□□ -0.01
HDDC3-201ENST00000330334 A0A1B0GWJ7 208 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 OR6C68A6NDL8 312 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 GPANK1O95872 356 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 MAGEA2P43356 314 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 GYS2P54840 703 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 MEP1BQ16820 701 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 DCAF12L2Q5VW00 463 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 SLC18B1Q6NT16 456 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 C1QL2Q7Z5L3 287 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 SPICQ8N5J4 248 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 ST7LQ8TDW4 575 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 ZNF418Q8TF45 676 aaPredicted RBP14.97□□□□□ -0.01
HDDC3-201ENST00000330334 POP5Q969H6 163 aaKnown RBP14.97□□□□□ -0.01
HDDC3-201ENST00000330334 ZNF582Q96NG8 517 aaPredicted RBP14.97□□□□□ -0.01
HDDC3-201ENST00000330334 SIGLEC11Q96RL6 698 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 DDOQ99489 341 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 C1QTNF5Q9BXJ0 243 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 RPRD1BQ9NQG5 326 aaKnown RBP14.97□□□□□ -0.01
HDDC3-201ENST00000330334 IL20Q9NYY1 176 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 PPP1R3CQ9UQK1 317 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 LYVE1Q9Y5Y7 322 aa14.97□□□□□ -0.01
HDDC3-201ENST00000330334 WNK2Q9Y3S1 2297 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 ISPDA4D126 451 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 FOXH1O75593 365 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 FSTL3O95633 263 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 SBK2P0C263 348 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 GGT2P36268 569 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 BTG1P62324 171 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 HLXQ14774 488 aaPredicted RBP14.96□□□□□ -0.01
HDDC3-201ENST00000330334 CORO6Q6QEF8 472 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 KLHL36Q8N4N3 616 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 NANPQ8TBE9 248 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 ITLN1Q8WWA0 313 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 OR2V2Q96R30 315 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 SLC30A2Q9BRI3 323 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 CDADC1Q9BWV3 514 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 MUC13Q9H3R2 512 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 GCM1Q9NP62 436 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 CDH10Q9Y6N8 788 aa14.96□□□□□ -0.01
HDDC3-201ENST00000330334 TANC2Q9HCD6 1990 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms