RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ZNF813Q6ZN06 617 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 DCXRQ7Z4W1 244 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 LYG2Q86SG7 212 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 WDFY1Q8IWB7 410 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 PAQR4Q8N4S7 273 aaPredicted RBP7.78□□□□□ -1.16
CLK1-201ENST00000321356 JAGN1Q8N5M9 183 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 RELL2Q8NC24 303 aaPredicted RBP7.78□□□□□ -1.16
CLK1-201ENST00000321356 LMX1AQ8TE12 382 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 RNF133Q8WVZ7 376 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 KCNK17Q96T54 332 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 PRRT1Q99946 306 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 AIFM2Q9BRQ8 373 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 ZMAT3Q9HA38 289 aaKnown RBP7.78□□□□□ -1.16
CLK1-201ENST00000321356 DUX4Q9UBX2 424 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 RAB22AQ9UL26 194 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 BRWD1Q9NSI6 2320 aa7.78□□□□□ -1.16
CLK1-201ENST00000321356 TRIOO75962 3097 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 CEP290O15078 2479 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 LOC101059948A0A1B0GTJ6 334 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 TMEM269A0A1B0GVZ9 245 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 A0A1W2PR77 199 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 MS4A18H0YCH9 400 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 TOR1AO14656 332 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 WDPCPO95876 746 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 HLA-AP01891 365 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 HSD11B1P28845 292 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FMODQ06828 376 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 UNC119Q13432 240 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 NSDHLQ15738 373 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 HYAL4Q2M3T9 481 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 MS4A18Q3C1V0 323 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 RNASE10Q5GAN6 216 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 LIN54Q6MZP7 749 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FAHD2BQ6P2I3 314 aaPredicted RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 DNM1P34Q6PK57 102 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 C17orf107Q6ZR85 190 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 Q6ZS52 159 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 SLC29A4Q7RTT9 530 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FJX1Q86VR8 437 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ACBD4Q8NC06 268 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 OR4S1Q8NGB4 309 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 OR10K1Q8NGX5 313 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 MITD1Q8WV92 249 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ZBTB8AQ96BR9 441 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FAHD2AQ96GK7 314 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ZDHHC12Q96GR4 267 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 GAL3ST1Q99999 423 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 CST11Q9H112 138 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 CHRDQ9H2X0 955 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 DHCR7Q9UBM7 475 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 COPS7AQ9UBW8 275 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FBLN5Q9UBX5 448 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FARSAQ9Y285 508 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 PLEKHA6Q9Y2H5 1048 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 NOP16Q9Y3C1 178 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 KANTRA0A1W2PQU2 76 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 C9orf170A2RU37 121 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 METTL21EPA6NDL7 271 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 P2RY10O00398 339 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 SOX1O00570 391 aaPredicted RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 BPNT1O95861 308 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 TTRP02766 147 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ZNF823P16415 610 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 IL11P20809 199 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FBLP22087 321 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 BDKRB2P30411 391 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 DAP3P51398 398 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 CXADRP78310 365 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 PPP1R1AQ13522 171 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 NKPD1Q17RQ9 610 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 SCGB2B2Q4G0G5 96 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ZNF529Q6P280 563 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 OGFOD3Q6PK18 319 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 CFAP77Q6ZQR2 320 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ACOT7LQ6ZUV0 252 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 MISPQ8IVT2 679 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ZNF248Q8NDW4 579 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 OR1L3Q8NH93 324 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 MFSD8Q8NHS3 518 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 PPP1R1CQ8WVI7 109 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 ST8SIA1Q92185 356 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 VRK1Q99986 396 aaPredicted RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 NUDT16L1Q9BRJ7 211 aaKnown RBP7.77□□□□□ -1.17
CLK1-201ENST00000321356 UQCC2Q9BRT2 126 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 TMEM185BQ9H7F4 350 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 CNTD2Q9H8S5 307 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 FAM206AQ9NX38 181 aa7.77□□□□□ -1.17
CLK1-201ENST00000321356 IGKV1D-43A0A0B4J1Z2 117 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 NPIPA5E9PKD4 350 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 DNASE2O00115 360 aaPredicted RBP7.76□□□□□ -1.17
CLK1-201ENST00000321356 SULT2B1O00204 365 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 CCSO14618 274 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 SCGNO76038 276 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 GP1BAP07359 652 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 GLULP15104 373 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 TBPP20226 339 aa7.76□□□□□ -1.17
CLK1-201ENST00000321356 CNR1P21554 472 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms