RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 POU3F2P20265 443 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FPR3P25089 353 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SOX2P48431 317 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PRAMEF18Q5VWM3 479 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CBLL1Q75N03 491 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TRAPPC6BQ86SZ2 158 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 NEURL3Q96EH8 262 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC7A7Q9UM01 511 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TRAV9-1A0A075B6T8 112 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TGFBR1P36897 503 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC6A12P48065 614 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 GPR18Q14330 331 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MBTPS1Q14703 1052 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SHEQ5VZ18 495 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 RGL4Q8IZJ4 473 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 UBXN10Q96LJ8 280 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 BCAS3Q9H6U6 928 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SIRT3Q9NTG7 399 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SETD2Q9BYW2 2564 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FCN1O00602 326 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CD1DP15813 335 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SSTR4P31391 388 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CLN3Q13286 438 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TPGS2Q68CL5 300 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC38A8A6NNN8 435 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 LEUTXA8MZ59 168 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MPIG6BO95866 241 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 EIF1P41567 113 aaKnown RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 AGTR2P50052 363 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 EMP1P54849 157 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 OR4D2P58180 307 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SQSTM1Q13501 440 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 RTN4IP1Q8WWV3 396 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PSMG3Q9BT73 122 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 GALPQ9UBC7 116 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FAM221AA4D161 298 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FCRL6Q6DN72 434 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 C10orf126Q8N4M7 172 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF558Q96NG5 402 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 RHBGQ9H310 441 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PARP11Q9NR21 331 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 HIF1ANQ9NWT6 349 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CLCF1Q9UBD9 225 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 HS3ST4Q9Y661 456 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 ADAMTSL1Q8N6G6 1762 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 GEMIN2O14893 280 aaKnown RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 LILRA4P59901 499 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 POLR2GP62487 172 aaKnown RBP eCLIP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC35B1P78383 322 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TAZQ16635 292 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FAM71F2Q6NXP2 309 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 UBALD2Q8IYN6 164 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 ABHD4Q8TB40 342 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 OR5M11Q96RB7 305 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MEIKINA0A087WXM9 373 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 XRCC2O43543 280 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 EIF4EP06730 217 aaKnown RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 HOXB5P09067 269 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 OR5M10Q6IEU7 315 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC35E1Q96K37 410 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 DDA1Q9BW61 102 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TMPRSS4Q9NRS4 437 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 DEC1Q9P2X7 70 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 FOXJ3Q9UPW0 622 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 AMDHD2Q9Y303 409 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MRPS23Q9Y3D9 190 aaKnown RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 GPR32O75388 356 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CLEC3AO75596 197 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 ETFBKMTQ8IXQ9 262 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TMEM239Q8WW34 195 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 NUS1Q96E22 293 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SYNPO2LQ9H987 977 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 DMRT3Q9NQL9 472 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TCFL5Q9UL49 500 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 POM121BA6NF01 834 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 A8MU76 341 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 EPHB6O15197 1021 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PIGAP37287 484 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC10A2Q12908 348 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 IL13RA2Q14627 380 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 GAB4Q2WGN9 574 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 CFAP52Q8N1V2 620 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 IL22RA1Q8N6P7 574 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 AKR1E2Q96JD6 320 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 WDR77Q9BQA1 342 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 DPH2Q9BQC3 489 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 PADI3Q9ULW8 664 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 A0A1B0GVT2 93 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TNFSF15O95150 251 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 SLC10A3P09131 477 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 NME2P22392 152 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 TMPRSS3P57727 454 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF684Q5T5D7 378 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MORN3Q6PF18 240 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-201ENST00000297405 DEGS2Q6QHC5 323 aa4.45□□□□□ -1.7
CSMD3-201ENST00000297405 MBOAT2Q6ZWT7 520 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms