RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ATF6BQ99941 703 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 RBM24Q9BX46 236 aaKnown RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 PRDM14Q9GZV8 571 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 SLC24A3Q9HC58 644 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 NOX4Q9NPH5 578 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 CENPMQ9NSP4 180 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 NUFIP1Q9UHK0 495 aaKnown RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF391Q9UJN7 358 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 MSRB2Q9Y3D2 182 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 ETV7Q9Y603 341 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 LHFPL6Q9Y693 200 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 V9GY05 133 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 DNAJC13O75165 2243 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 MED12Q93074 2177 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 FABP12A6NFH5 140 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF587BE7ETH6 402 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 CTDSP2O14595 271 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 MAGEB4O15481 346 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 RRP8O43159 456 aaKnown RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 MPZL1O95297 269 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 GPANK1O95872 356 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 CRYABP02511 175 aaKnown RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 APOA1P02647 267 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ERCC1P07992 297 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 CLEC2LP0C7M8 214 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 CALCBP10092 127 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 EPXP11678 715 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 WT1P19544 449 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 NR4A2P43354 598 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 KIR3DL2P43630 455 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 FOXC1Q12948 553 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 RAB35Q15286 201 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 SGCAQ16586 387 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 EIF2S3LQ2VIR3 472 aaKnown RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ELFN2Q5R3F8 820 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 IDNKQ5T6J7 187 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 LRRC69Q6ZNQ3 347 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF627Q7L945 461 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 FGD2Q7Z6J4 655 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 LINC00346Q8IVM7 164 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ELMOD2Q8IZ81 293 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 PRSS35Q8N3Z0 413 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 IL17RDQ8NFM7 739 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ROBO4Q8WZ75 1007 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 RELTQ969Z4 430 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 TMEM106AQ96A25 262 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 RNF166Q96A37 237 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 WDYHV1Q96HA8 205 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 DIRAS2Q96HU8 199 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 DCLRE1CQ96SD1 692 aaKnown RBP8.59□□□□□ -1.03
PHGDH-215ENST00000641371 AMELYQ99218 206 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 FOXB1Q99853 325 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 NEK6Q9HC98 313 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ABCB9Q9NP78 766 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 TMEM38BQ9NVV0 291 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 FAM206AQ9NX38 181 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 ASH2LQ9UBL3 628 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 SPATA2Q9UM82 520 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 GTF2A1LQ9UNN4 478 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 EMC9Q9Y3B6 208 aa8.59□□□□□ -1.03
PHGDH-215ENST00000641371 A0A1B0GVI7 797 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 SLC22A20A6NK97 555 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 ANXA2P2A6NMY6 339 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 H0YC42 278 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 CNOT4O95628 575 aaKnown RBP8.58□□□□□ -1.04
PHGDH-215ENST00000641371 ANXA2P07355 339 aaKnown RBP8.58□□□□□ -1.04
PHGDH-215ENST00000641371 PTGER4P35408 488 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 RPS27P42677 84 aaKnown RBP8.58□□□□□ -1.04
PHGDH-215ENST00000641371 EVX1P49640 407 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 PITPNAQ00169 270 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 SRYQ05066 204 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 GLT8D1Q68CQ7 371 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 OR2A2Q6IF42 318 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 DRAM2Q6UX65 266 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 FAM131AQ6UXB0 335 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 STAC2Q6ZMT1 411 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 Q6ZS92 163 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 P4HA3Q7Z4N8 544 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 LUZP2Q86TE4 346 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 LAX1Q8IWV1 398 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 CDH26Q8IXH8 852 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 OR52H1Q8NGJ2 320 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 ABHD3Q8WU67 409 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 CHPT1Q8WUD6 406 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 RAB40AQ8WXH6 277 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 HSD17B8Q92506 261 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 NABP1Q96AH0 204 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 APH1AQ96BI3 265 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 GMPPAQ96IJ6 420 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF845Q96IR2 970 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-215ENST00000641371 FOXN4Q96NZ1 517 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF416Q9BWM5 594 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 CRLF2Q9HC73 371 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 GPR35Q9HC97 309 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 G6PC2Q9NQR9 355 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 PLSCR2Q9NRY7 297 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 COMMD3Q9UBI1 195 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 UPB1Q9UBR1 384 aa8.58□□□□□ -1.04
PHGDH-215ENST00000641371 KLK13Q9UKR3 277 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms