RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	TEP1	Q99973	2627 aa	Known RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	SMAD7	O15105	426 aa	Known RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	SOX14	O95416	240 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ABHD16A	O95870	558 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	TF	P02787	698 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	TP53	P04637	393 aa	Predicted RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	HEXA	P06865	529 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	PAICS	P22234	425 aa	Known RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	FMO3	P31513	532 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	WNT5A	P41221	380 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	RIPPLY3	P57055	190 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	PPP1CB	P62140	327 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	LOXL1	Q08397	574 aa	Predicted RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ATP6AP1	Q15904	470 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	MSMP	Q1L6U9	139 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ELFN2	Q5R3F8	820 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	TMEM154	Q6P9G4	183 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	TMEM179B	Q7Z7N9	219 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	LRP11	Q86VZ4	500 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ZNF101	Q8IZC7	436 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	CIART	Q8N365	385 aa	Predicted RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ZNF786	Q8N393	782 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ZNF525	Q8N782	197 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ATG16L2	Q8NAA4	619 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	OR5K1	Q8NHB7	308 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ABHD4	Q8TB40	342 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	UBASH3B	Q8TF42	649 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	FOXN4	Q96NZ1	517 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	PIMREG	Q9BSJ6	248 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	NMNAT2	Q9BZQ4	307 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	NTN4	Q9HB63	628 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	HINT3	Q9NQE9	182 aa	Known RBP	12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	TAAR3P	Q9P1P4	343 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	CYB5R1	Q9UHQ9	305 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	ENOPH1	Q9UHY7	261 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	LHFPL6	Q9Y693	200 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	MED13L	Q71F56	2210 aa		12.23	□□□□□ -0.45
SDHD-209	ENST00000640554	RER1	O15258	196 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	TIPRL	O75663	272 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	DAO	P14920	347 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	GIF	P27352	417 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	CCDC92	Q53HC0	331 aa	Predicted RBP	12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	ZMAT1	Q5H9K5	638 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	TEX30	Q5JUR7	227 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	PARP8	Q8N3A8	854 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	CYB561A3	Q8NBI2	242 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	ICA1L	Q8NDH6	482 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	OR4Q3	Q8NH05	313 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	KLF14	Q8TD94	323 aa	Predicted RBP	12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	DIRC2	Q96SL1	478 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	OSBPL10	Q9BXB5	764 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	OR2J1	Q9GZK6	312 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	GRIP1	Q9Y3R0	1128 aa		12.22	□□□□□ -0.45
SDHD-209	ENST00000640554	IGHV4-30-2	A0A087WSY4	118 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	PLSCR5	A0PG75	271 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	C17orf100	A8MU93	164 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	CLPTM1	O96005	669 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	IGFBP1	P08833	259 aa	Predicted RBP	12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	POU1F1	P28069	291 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	GGT2	P36268	569 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	ALDH3B1	P43353	468 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	ESRRG	P62508	458 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	CDK5	Q00535	292 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	CRMP1	Q14194	572 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	GINS1	Q14691	196 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	SLC18B1	Q6NT16	456 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	FAHD1	Q6P587	224 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	ZDHHC13	Q8IUH4	622 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	SLC25A40	Q8TBP6	338 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	RDH5	Q92781	318 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	PTP4A1	Q93096	173 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	PITX2	Q99697	317 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	OR51B6	Q9H340	312 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	KIF17	Q9P2E2	1029 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	FZR1	Q9UM11	496 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	MTOR	P42345	2549 aa		12.21	□□□□□ -0.45
SDHD-209	ENST00000640554	ACAN	P16112	2415 aa		12.21	□□□□□ -0.46
SDHD-209	ENST00000640554	VWC2L	B2RUY7	222 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554		G3V2T6	193 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	LY6G6D	O95868	133 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	NGF	P01138	241 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	ADH4	P08319	380 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	SPI1	P17947	270 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	USF1	P22415	310 aa	Predicted RBP	12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	PRKACG	P22612	351 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	PYCR1	P32322	319 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	NR4A2	P43354	598 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	TMEM33	P57088	247 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	ERVS71-1	P61550	626 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	CCNI	Q14094	377 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	MEP1B	Q16820	701 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	PCK2	Q16822	640 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	ZFP1	Q6P2D0	407 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	RFPL4B	Q6ZWI9	263 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	RHOU	Q7L0Q8	258 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	SPTSSA	Q969W0	71 aa		12.2	□□□□□ -0.46
SDHD-209	ENST00000640554	PLEKHA8	Q96JA3	519 aa		12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms