RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	NKPD1	Q17RQ9	610 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TMEM249	Q2WGJ8	235 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC36A3	Q495N2	470 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MBNL2	Q5VZF2	373 aa	Known RBP	11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RFPL4B	Q6ZWI9	263 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	GJC3	Q8NFK1	279 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	OR2T33	Q8NG76	320 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	OR4Q3	Q8NH05	313 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	OR1F12	Q8NHA8	337 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC25A40	Q8TBP6	338 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	KLF14	Q8TD94	323 aa	Predicted RBP	11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLCO4A1	Q96BD0	722 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	POM121	Q96HA1	1249 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	NIPSNAP1	Q9BPW8	284 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	OR2J1	Q9GZK6	312 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	DNAJB9	Q9UBS3	223 aa		11.52	□□□□□ -0.57
ARHGEF1-222	ENST00000600517		H3BSA7	217 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CD5L	O43866	347 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SOX14	O95416	240 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	HPX	P02790	462 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	GCH1	P30793	250 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	GGT2	P36268	569 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MPV17	P39210	176 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MMP15	P51511	669 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ARHGDIA	P52565	204 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MRPS11	P82912	194 aa	Known RBP	11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CBX1	P83916	185 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PCGF3	Q3KNV8	242 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ELFN2	Q5R3F8	820 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SPATA46	Q5T0L3	261 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TMEM154	Q6P9G4	183 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CYB561A3	Q8NBI2	242 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC37A3	Q8NCC5	494 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	OR2T4	Q8NH00	348 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RDH5	Q92781	318 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	DCLRE1C	Q96SD1	692 aa	Known RBP	11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RBM4	Q9BWF3	364 aa	Known RBP	11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	NMNAT2	Q9BZQ4	307 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	FN3K	Q9H479	309 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TBC1D23	Q9NUY8	699 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	NKIRAS2	Q9NYR9	191 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PDP1	Q9P0J1	537 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CYB5R1	Q9UHQ9	305 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	KLHL21	Q9UJP4	597 aa		11.51	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	LYNX1	G3V0Z9	82 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TLX2	O43763	284 aa	Predicted RBP	11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ABHD16A	O95870	558 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MT-ND5	P03915	603 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	LYNX1	P0DP58	116 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	COL8A2	P25067	703 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RIN1	Q13671	783 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	GGTLC2	Q14390	218 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ALKBH6	Q3KRA9	238 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TMEM255A	Q5JRV8	349 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC18B1	Q6NT16	456 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CORO6	Q6QEF8	472 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SNX33	Q8WV41	574 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ZNRF4	Q8WWF5	429 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC7A6	Q92536	515 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	COG8	Q96MW5	612 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	COQ7	Q99807	217 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CDADC1	Q9BWV3	514 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	BPESC1	Q9GZL8	116 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	HDHD2	Q9H0R4	259 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	NTN4	Q9HB63	628 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ARMC1	Q9NVT9	282 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MRPL22	Q9NWU5	206 aa	Known RBP	11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	KCNG2	Q9UJ96	466 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	POLR1D	Q9Y2S0	133 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	STARD10	Q9Y365	291 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	GRIP1	Q9Y3R0	1128 aa		11.5	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	IGHV4-61	A0A0C4DH41	118 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	INAFM1	C9JVW0	142 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517		H3BN98	237 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517		J3QW42	95 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	E2F6	O75461	281 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	HLA-DQA2	P01906	255 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ANXA8	P13928	327 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ZNF23	P17027	643 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PRKACG	P22612	351 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PYCR1	P32322	319 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	LIPA	P38571	399 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	MAGEB1	P43366	347 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	RGS6	P49758	472 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	ZNF81	P51508	661 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	SLC25A1	P53007	311 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	TMEM33	P57088	247 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PSG7	Q13046	419 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CRMP1	Q14194	572 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	LINC00346	Q8IVM7	164 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	PROKR2	Q8NFJ6	384 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	UTP4	Q969X6	686 aa	Known RBP	11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	NRBF2	Q96F24	287 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CMC2	Q9NRP2	79 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CYSLTR2	Q9NS75	346 aa		11.49	□□□□□ -0.57
ARHGEF1-222	ENST00000600517	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.49	□□□□□ -0.57

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