RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RPL13AP3Q6NVV1 102 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 DNM1P34Q6PK57 102 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 UNQ6126/PRO20091Q6UXV3 157 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 SLC26A10Q8NG04 563 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 IPCEF1Q8WWN9 437 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 SLC7A6Q92536 515 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 YIPF5Q969M3 257 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 FN3KQ9H479 309 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 ELOVL3Q9HB03 270 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 TBCCD1Q9NVR7 557 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 PLEK2Q9NYT0 353 aa15.78■□□□□ 0.12
SHKBP1-202ENST00000593764 A8MV72 311 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 TACSTD2P09758 323 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 CENPAP49450 140 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 MMP15P51511 669 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 CCL8P80075 99 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 GLO1Q04760 184 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 MOGQ16653 247 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 CYB5R2Q6BCY4 276 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 PRIMA1Q86XR5 153 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 OR52L1Q8NGH7 329 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 OR1F12Q8NHA8 337 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 RDH5Q92781 318 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 POFUT1Q9H488 388 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 NKIRAS2Q9NYR9 191 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 KLHL21Q9UJP4 597 aa15.77■□□□□ 0.12
SHKBP1-202ENST00000593764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 DHRS12A0PJE2 317 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 LRP5LA4QPB2 252 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 H3BSA7 217 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 ABHD16AO95870 558 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 CST1P01037 141 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 DBHP09172 617 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 GCH1P30793 250 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 MRPS11P82912 194 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 TEKQ02763 1124 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 BNIP1Q12981 228 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 TRIP10Q15642 601 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 RSPO1Q2MKA7 263 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 TMEM154Q6P9G4 183 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 CORO6Q6QEF8 472 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 ARL9Q6T311 187 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 CD300LDQ6UXZ3 194 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 TMEM179BQ7Z7N9 219 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 LNX2Q8N448 690 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 CYB561A3Q8NBI2 242 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 GJC3Q8NFK1 279 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 SNX33Q8WV41 574 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 ZNRF4Q8WWF5 429 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 NIPSNAP1Q9BPW8 284 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 SOX7Q9BT81 388 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 CHODLQ9H9P2 273 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 MRPL22Q9NWU5 206 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 ATPIF1Q9UII2 106 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 POMPQ9Y244 141 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 STARD10Q9Y365 291 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 GRIP1Q9Y3R0 1128 aa15.76■□□□□ 0.11
SHKBP1-202ENST00000593764 GSC2O15499 205 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 RP2O75695 350 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 DNAJC8O75937 253 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 SOX14O95416 240 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 GSTM3P21266 225 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 ACHEP22303 614 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 IL2RGP31785 369 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 GGT2P36268 569 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 GZMKP49863 264 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 ARHGDIAP52565 204 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 COX10Q12887 443 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 PSG7Q13046 419 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 GK3PQ14409 553 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 PCGF3Q3KNV8 242 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 HIPK1Q86Z02 1210 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 OR10G2Q8NGC3 310 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 OR4Q3Q8NH05 313 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 MSI2Q96DH6 328 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 FEVQ99581 238 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 TSSK6Q9BXA6 273 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 CADM1Q9BY67 442 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 ZNF275Q9NSD4 429 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 POLR1DQ9Y2S0 133 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 CUBNO60494 3623 aa15.75■□□□□ 0.11
SHKBP1-202ENST00000593764 TCRBV3S1A0A5B6 114 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 TUBG1P23258 451 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 ZNF81P51508 661 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 TMEM33P57088 247 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 FLOT2Q14254 428 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 SLC18B1Q6NT16 456 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 SLC37A3Q8NCC5 494 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 GIPC3Q8TF64 312 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 RBM4Q9BWF3 364 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 TUBG2Q9NRH3 451 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 TBC1D23Q9NUY8 699 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 ARMC1Q9NVT9 282 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 CYB5R1Q9UHQ9 305 aa15.74■□□□□ 0.11
SHKBP1-202ENST00000593764 ARRDC5A6NEK1 342 aa15.73■□□□□ 0.11
SHKBP1-202ENST00000593764 ZSCAN5BA6NJL1 495 aa15.73■□□□□ 0.11
SHKBP1-202ENST00000593764 IGHV1-46P01743 117 aa15.73■□□□□ 0.11
SHKBP1-202ENST00000593764 MT-ND5P03915 603 aa15.73■□□□□ 0.11
SHKBP1-202ENST00000593764 ZNF16P17020 682 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms