RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 BBS10Q8TAM1 723 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 HAVCR1Q96D42 359 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 NMD3Q96D46 503 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 MAELQ96JY0 434 aaKnown RBP11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 SIGLEC9Q9Y336 463 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
CSNK1D-219ENST00000581660 C3orf84H3BNL1 204 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 ABHD16AO95870 558 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 ZCCHC18P0CG32 403 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 IDO1P14902 403 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 ETS2P15036 469 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 CDAP32320 146 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 SRP9P49458 86 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 POLR2JP52435 117 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 CDH12P55289 794 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 ERVK-25P63136 954 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 EMX1Q04741 257 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 CD69Q07108 199 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 OR1Q1Q15612 314 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 RUNDC3AQ59EK9 446 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 FAM201AQ5SY85 155 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 NPRL2Q8WTW4 380 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 CMBLQ96DG6 245 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 PAIP1Q9H074 479 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 MMP28Q9H239 520 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 TMEM27Q9HBJ8 222 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 SLCO1B3Q9NPD5 702 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 SDR39U1Q9NRG7 319 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 SLAMF8Q9P0V8 285 aa11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 CAB39Q9Y376 341 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-219ENST00000581660 ANKRD61A6NGH8 418 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 TPST2O60704 377 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 SLC2A10O95528 541 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 BMP2P12643 396 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 HOXB9P17482 250 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 PMELP40967 661 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 ERFP50548 548 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 MAGOHP61326 146 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 NCALDP61601 193 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 RGNQ15493 299 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 HDDC2Q7Z4H3 204 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 IGFN1Q86VF2 1251 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 MSRB3Q8IXL7 192 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 ATG16L2Q8NAA4 619 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 GTF2H4Q92759 462 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 ITCHQ96J02 903 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 TECTBQ96PL2 329 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 PPA2Q9H2U2 334 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 SLC25A37Q9NYZ2 338 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 ZIM2Q9NZV7 527 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 ZNF229Q9UJW7 825 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 NDRG4Q9ULP0 352 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 TIMM10BQ9Y5J6 103 aa11.38□□□□□ -0.59
CSNK1D-219ENST00000581660 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 WI2-2373I1.2A0A1W2PRP0 233 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 UBDO15205 165 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 TPST1O60507 370 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 TRMUO75648 421 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 CST2P09228 141 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 ASAH2BP0C7U1 165 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 ACADSP16219 412 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 GATA4P43694 442 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 RGS8P57771 180 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 PCBD1P61457 104 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 GUCY1A3Q02108 690 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 DEFB121Q5J5C9 76 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 METAP1DQ6UB28 335 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 HDXQ7Z353 690 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 OR10AD1Q8NGE0 317 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 OR13G1Q8NGZ3 307 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 PPP1R35Q8TAP8 253 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 Q8TCH9 128 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 ASB10Q8WXI3 467 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 WFDC6Q9BQY6 131 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 RANBP3Q9H6Z4 567 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 NANSQ9NR45 359 aa11.37□□□□□ -0.59
CSNK1D-219ENST00000581660 IGKV1D-43A0A0B4J1Z2 117 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 A0A1B0GWJ7 208 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 GMNCA6NCL1 334 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 ADARB2-AS1A8MUL3 147 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 CLIC1O00299 241 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 CH25HO95992 272 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 F13BP05160 661 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 COX5BP10606 129 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 RAC2P15153 192 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 IGLL1P15814 213 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 SGCAQ16586 387 aa11.36□□□□□ -0.59
CSNK1D-219ENST00000581660 NSUN5P1Q3KNT7 163 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms