RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SYT9Q86SS6 491 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 LUZP2Q86TE4 346 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ZNF433Q8N7K0 673 aaPredicted RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 RELL2Q8NC24 303 aaPredicted RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 SMAP2Q8WU79 429 aaPredicted RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 HTRA1Q92743 480 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 CCDC120Q96HB5 630 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ZNF649Q9BS31 505 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ZNF416Q9BWM5 594 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 ERVK13-1Q9NX77 482 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ELOVL5Q9NYP7 299 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 LAMP5Q9UJQ1 280 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 POLR1DQ9Y2S0 133 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ARHGAP21Q5T5U3 1957 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 A0A1W2PQL4 384 aaPredicted RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 CIB4A0PJX0 185 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 EEF1E1-BLOC1S5C9J1V9 151 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 EEF1E1O43324 174 aaKnown RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 LIMS3P0CW19 117 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 LIMS4P0CW20 117 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 PSKH1P11801 424 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 RPS27P42677 84 aaKnown RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 ETV1P50549 477 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 HCCSP53701 268 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 PCBD1P61457 104 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ZNF85Q03923 595 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 EIF2B1Q14232 305 aaKnown RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 GALEQ14376 348 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 GABRA6Q16445 453 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 DGUOKQ16854 277 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 SLC25A35Q3KQZ1 300 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 SFRP5Q5T4F7 317 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 OR7E24Q6IFN5 339 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 SLC16A14Q7RTX9 510 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 CXorf67Q86X51 503 aaPredicted RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 SKA3Q8IX90 412 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 CCDC36Q8IYA8 594 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 C17orf78Q8N4C9 275 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 TBX5Q99593 518 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ABHD6Q9BV23 337 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 HDHD5Q9BXW7 423 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 C1orf198Q9H425 327 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ASH2LQ9UBL3 628 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
SPG7-209ENST00000564047 COPS3Q9UNS2 423 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
SPG7-209ENST00000564047 ALPK2Q86TB3 2170 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 A0A096LPE4 126 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 A0A1W2PPZ6 126 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 TMEM129A0AVI4 362 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 LYZL6O75951 148 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 LCKP06239 509 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 CD36P16671 472 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 PSMB1P20618 241 aaKnown RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 ACTA2P62736 377 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 ACTG2P63267 376 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 TUBA1BP68363 451 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 EGR3Q06889 387 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 SCRN3Q0VDG4 424 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 TBRG1Q3YBR2 411 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 ZNF322Q6U7Q0 402 aaPredicted RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 TUBA1AQ71U36 451 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 RHOUQ7L0Q8 258 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 LHFPL3Q86UP9 236 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 LINC00346Q8IVM7 164 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 GJC3Q8NFK1 279 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 OR52N5Q8NH56 324 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 ST7LQ8TDW4 575 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 THEM6Q8WUY1 208 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 S100ZQ8WXG8 99 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 ALG8Q9BVK2 526 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 WDR12Q9GZL7 423 aaKnown RBP11.29□□□□□ -0.6
SPG7-209ENST00000564047 GALNT8Q9NY28 637 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 CLEC2DQ9UHP7 191 aa11.29□□□□□ -0.6
SPG7-209ENST00000564047 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms