RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CFAP77Q6ZQR2 320 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 OR52N4Q8NGI2 321 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 OR1J2Q8NGS2 313 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 MFFQ9GZY8 342 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 PLEKHA1Q9HB21 404 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 IFT46Q9NQC8 304 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 ASH2LQ9UBL3 628 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 A0A1W2PP11 408 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 LILRA5A6NI73 299 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 ALG1L2C9J202 215 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 IGF2P01344 180 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 GABRA4P48169 554 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 HSF1Q00613 529 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 PMPCAQ10713 525 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 BAMBIQ13145 260 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 GABRG1Q8N1C3 465 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 BEST3Q8N1M1 668 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 WDR77Q9BQA1 342 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 NDUFB6O95139 128 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 PMP2P02689 132 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 SRFP11831 508 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 AVPR2P30518 371 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 OR52N5Q8NH56 324 aa12.24□□□□□ -0.45
PRPF40B-209ENST00000548825 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 RER1O15258 196 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 RAMP1O60894 148 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF205O95201 554 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF20P17024 532 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 SPINK2P20155 84 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF684Q5T5D7 378 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF283Q8N7M2 679 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 TMEM234Q8WY98 164 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 MMACHCQ9Y4U1 282 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 A0A1W2PR77 199 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 H7C417 338 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 GLI4P10075 376 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC26A5P58743 744 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 TRAPPC6BQ86SZ2 158 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 OR4K17Q8NGC6 315 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 GPR137Q96N19 417 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 C7orf50Q9BRJ6 194 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 ADAM19Q9H013 955 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
PRPF40B-209ENST00000548825 A0A1B0GUH1 482 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 RP2O75695 350 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 NXPH1P58417 271 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GALNT11Q8NCW6 608 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 C11orf40Q8WZ69 217 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 ZNF471Q9BX82 626 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 DEFB126Q9BYW3 111 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GSX2Q9BZM3 304 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 HEXA-AS1Q9H8Q6 139 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 RIF1Q5UIP0 2472 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 OR2T1O43869 369 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GAAP10253 952 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 CRABP1P29762 137 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GUCA1AP43080 201 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 DLX5P56178 289 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 EGR3Q06889 387 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 RNASE10Q5GAN6 216 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 HACD4Q5VWC8 232 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 OLFML2AQ68BL7 652 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 UNQ6126/PRO20091Q6UXV3 157 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 FAM57BQ71RH2 274 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 ANGPTL5Q86XS5 388 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 EID2Q8N6I1 236 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 STEAP2Q8NFT2 490 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 OR6N1Q8NGY5 312 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 ST6GALNAC5Q9BVH7 336 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 CNTD2Q9H8S5 307 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 COMMD9Q9P000 198 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC17A2O00624 439 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 MBTPS2O43462 519 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GSTZ1O43708 216 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 TSPAN2O60636 221 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 WDPCPO95876 746 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 APOC3P02656 99 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 CSF1P09603 554 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 STARP49675 285 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GMFBP60983 142 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 MYBPHQ13203 477 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 H1FNTQ75WM6 255 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 RNF128Q8TEB7 428 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 SLAMF6Q96DU3 332 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 GNRHR2Q96P88 292 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 SLC22A11Q9NSA0 550 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 KCNN3Q9UGI6 736 aa12.22□□□□□ -0.45
PRPF40B-209ENST00000548825 NAP1L6A6NFF2 107 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms