RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 LSM6P62312 80 aaKnown RBP13.75□□□□□ -0.21
DDX55-212ENST00000544738 MVKQ03426 396 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SLC3A1Q07837 685 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 FOXL1Q12952 345 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 AQP6Q13520 282 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
DDX55-212ENST00000544738 ACSM5Q6NUN0 579 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 DPY19L2P2Q6ZN68 376 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 TEX29Q8N6K0 151 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 RSRC1Q96IZ7 334 aaKnown RBP13.75□□□□□ -0.21
DDX55-212ENST00000544738 COG8Q96MW5 612 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 KLHL21Q9UJP4 597 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 UNC119BA6NIH7 251 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 DOK2O60496 412 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 SLC16A7O60669 478 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 CTLA4P16410 223 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 HTR5AP47898 357 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 RPS6KA3P51812 740 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 GLB1L2Q8IW92 636 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 RNF148Q8N7C7 305 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 CCL17Q92583 94 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 GTF3AQ92664 365 aaKnown RBP13.74□□□□□ -0.21
DDX55-212ENST00000544738 RASD2Q96D21 266 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 PYURFQ96I23 114 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 DHRS1Q96LJ7 313 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 SYT4Q9H2B2 425 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 RERGLQ9H628 205 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 ESM1Q9NQ30 184 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 PLEK2Q9NYT0 353 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
DDX55-212ENST00000544738 MAGEL2Q9UJ55 1249 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 WIPI2Q9Y4P8 454 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 IER3IP1Q9Y5U9 82 aa13.74□□□□□ -0.21
DDX55-212ENST00000544738 TRBV4-1A0A0J9YWV2 114 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 ZSCAN5BA6NJL1 495 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 TIMM8AO60220 97 aaPredicted RBP13.73□□□□□ -0.21
DDX55-212ENST00000544738 GADD45GO95257 159 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 TXNDC12O95881 172 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 CD55P08174 381 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 HSD17B1P14061 328 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 CRABP1P29762 137 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 MTX3Q5HYI7 312 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 PGM2L1Q6PCE3 622 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 SMARCD3Q6STE5 483 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
DDX55-212ENST00000544738 FAM86B1Q8N7N1 296 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 OR52J3Q8NH60 311 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 MCUR1Q96AQ8 359 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 ATPIF1Q9UII2 106 aa13.73□□□□□ -0.21
DDX55-212ENST00000544738 COA3Q9Y2R0 106 aaPredicted RBP13.73□□□□□ -0.21
DDX55-212ENST00000544738 J3QW42 95 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 SOCS2O14508 198 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 UBOX5O94941 541 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 DIRAS1O95057 198 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 TNFSF4P23510 183 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 ZFP36P26651 326 aaKnown RBP13.72□□□□□ -0.21
DDX55-212ENST00000544738 RGS6P49758 472 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 FXYD6P3P58550 94 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 PSG7Q13046 419 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 SEC23BQ15437 767 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 KCNMB1Q16558 191 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 TMEM255AQ5JRV8 349 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 SAMD4BQ5PRF9 694 aaKnown RBP13.72□□□□□ -0.21
DDX55-212ENST00000544738 DNM1P34Q6PK57 102 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
DDX55-212ENST00000544738 PGAM4Q8N0Y7 254 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 FUZQ9BT04 418 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
DDX55-212ENST00000544738 ASH2LQ9UBL3 628 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
DDX55-212ENST00000544738 IMPA2O14732 288 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 MPZL1O95297 269 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 PNPP00491 289 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 AVPP01185 164 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 IGHV2-5P01817 119 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 HKR1P10072 659 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 TNFRSF1AP19438 455 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 KITLGP21583 273 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 IFNGR2P38484 337 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 CDKN2AP42771 156 aaKnown RBP13.71□□□□□ -0.21
DDX55-212ENST00000544738 UBA52P62987 128 aaKnown RBP13.71□□□□□ -0.21
DDX55-212ENST00000544738 TNFAIP6P98066 277 aaPredicted RBP13.71□□□□□ -0.21
DDX55-212ENST00000544738 CDK5R2Q13319 367 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 SPATS1Q496A3 300 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 PTCHD4Q6ZW05 846 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 PTP4A1Q93096 173 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 HAVCR1Q96D42 359 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 NSMCE2Q96MF7 247 aa13.71□□□□□ -0.21
DDX55-212ENST00000544738 ERMAPQ96PL5 475 aaPredicted RBP13.71□□□□□ -0.21
DDX55-212ENST00000544738 DCLRE1CQ96SD1 692 aaKnown RBP13.71□□□□□ -0.21
DDX55-212ENST00000544738 CDRT15Q96T59 188 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms