RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RAD52P43351 418 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 HTR5AP47898 357 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
RPAIN-205ENST00000536255 SNTB2Q13425 540 aaKnown RBP11.69□□□□□ -0.54
RPAIN-205ENST00000536255 RAB35Q15286 201 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 LINC01590Q5TEZ4 76 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 LCN1P1Q5VSP4 162 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 KRT80Q6KB66 452 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 VASH1Q7L8A9 365 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-205ENST00000536255 C1orf174Q8IYL3 243 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 TCEANCQ8N8B7 351 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 ZNF511Q8NB15 262 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 OR8J1Q8NGP2 316 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 TMEM163Q8TC26 289 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 IPCEF1Q8WWN9 437 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-205ENST00000536255 HRASLS5Q96KN8 279 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 INTS14Q96SY0 518 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 SLC29A1Q99808 456 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 HCAR1Q9BXC0 346 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 BCL2L14Q9BZR8 327 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 VCXQ9H320 206 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 ZNF442Q9H7R0 627 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 DLL4Q9NR61 685 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 IMPAD1Q9NX62 359 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 CYB5R1Q9UHQ9 305 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 GDF2Q9UK05 429 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-205ENST00000536255 COMMD3-BMI1R4GMX3 469 aa11.69□□□□□ -0.54
RPAIN-205ENST00000536255 PLCE1Q9P212 2302 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 OR6C6A6NF89 314 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ZNF593O00488 134 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 SYNGR3O43761 229 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 PRKYO43930 277 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 BMP4P12644 408 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 CCL2P13500 99 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 GLRXP35754 106 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 GGT2P36268 569 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 POLR2IP36954 125 aaKnown RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 HIST1H3AP68431 136 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 HGFACQ04756 655 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 DBPQ10586 325 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ECH1Q13011 328 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ZIK1Q3SY52 487 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 TEX30Q5JUR7 227 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ELFN2Q5R3F8 820 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 HIST2H3PS2Q5TEC6 136 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 NXNL2Q5VZ03 156 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 SLC18B1Q6NT16 456 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 HIST2H3AQ71DI3 136 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 SHFQ7M4L6 423 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ERI1Q8IV48 349 aaKnown RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 LINC00346Q8IVM7 164 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 GID4Q8IVV7 300 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ZNRF4Q8WWF5 429 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 TRUB1Q8WWH5 349 aaKnown RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 POM121L2Q96KW2 1035 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 Q96MF0 132 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 PITX2Q99697 317 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 COQ7Q99807 217 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 TOR3AQ9H497 397 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 WDR76Q9H967 626 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
RPAIN-205ENST00000536255 SMPD3Q9NY59 655 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
RPAIN-205ENST00000536255 ARID1AO14497 2285 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 USF3Q68DE3 2245 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 SLC22A31A6NKX4 558 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-205ENST00000536255 SPARCP09486 303 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 FOSL1P15407 271 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 SLC2A5P22732 501 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 SERPINF1P36955 418 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 UCP2P55851 309 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 APOFQ13790 326 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 PCK2Q16822 640 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 CCDC92Q53HC0 331 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-205ENST00000536255 CORO6Q6QEF8 472 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 GALNT4Q8N4A0 578 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 ZNF555Q8NEP9 628 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 OR6N2Q8NGY6 317 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 FAM81AQ8TBF8 368 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-205ENST00000536255 IL4I1Q96RQ9 567 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 DCLRE1CQ96SD1 692 aaKnown RBP11.67□□□□□ -0.54
RPAIN-205ENST00000536255 ATF6BQ99941 703 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 CACNG6Q9BXT2 260 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 MARCH7Q9H992 704 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 GMPPBQ9Y5P6 360 aa11.67□□□□□ -0.54
RPAIN-205ENST00000536255 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
RPAIN-205ENST00000536255 B9A039 149 aa11.66□□□□□ -0.54
RPAIN-205ENST00000536255 ABHD16AO95870 558 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms