RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	LZTS2	Q9BRK4	669 aa		2.61	□□□□□ -1.99
RDX-208	ENST00000530085	TDRD3	Q9H7E2	651 aa	Known RBP	2.61	□□□□□ -1.99
RDX-208	ENST00000530085	CYP3A43	Q9HB55	503 aa		2.61	□□□□□ -1.99
RDX-208	ENST00000530085	CLN6	Q9NWW5	311 aa		2.61	□□□□□ -1.99
RDX-208	ENST00000530085	MROH5	Q6ZUA9	1318 aa		2.61	□□□□□ -1.99
RDX-208	ENST00000530085	NEURL4	Q96JN8	1562 aa		2.61	□□□□□ -1.99
RDX-208	ENST00000530085	SMARCA4	P51532	1647 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CDC42BPB	Q9Y5S2	1711 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	SERPINE3	A8MV23	424 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF99	A8MXY4	864 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085		K7EMT4	169 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	TRDMT1	O14717	391 aa	Known RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	SIVA1	O15304	175 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	SCEL	O95171	688 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ADRB3	P13945	408 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	PRKACA	P17612	351 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	WARS	P23381	471 aa	Known RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	DRD3	P35462	400 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CEACAM3	P40198	252 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	BCAP31	P51572	246 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF133	P52736	654 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	VSX2	P58304	361 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	DNAJC3	Q13217	504 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CAPRIN1	Q14444	709 aa	Known RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	QPRT	Q15274	297 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	TPTE2P1	Q5T6R2	138 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	C12orf54	Q6X4T0	127 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	MBOAT2	Q6ZWT7	520 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	FAM122B	Q7Z309	247 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	PCP2	Q8IVA1	136 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CMTM8	Q8IZV2	173 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	NPW	Q8N729	165 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF433	Q8N7K0	673 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085		Q8N976	141 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	NOXO1	Q8NFA2	376 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	OR52E2	Q8NGJ4	325 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	OR10G4	Q8NGN3	311 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZFP90	Q8TF47	636 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CA5BP1	Q8WTZ4	195 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	TMEM230	Q96A57	120 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	KIAA1143	Q96AT1	154 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	GALNT14	Q96FL9	552 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CSPG4P5	Q96PW8	444 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	SLC25A2	Q9BXI2	301 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	IL22	Q9GZX6	179 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	IFI27L2	Q9H2X8	130 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	MYOZ2	Q9NPC6	264 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ISYNA1	Q9NPH2	558 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	ZC4H2	Q9NQZ6	224 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	RBAK	Q9NYW8	714 aa	Predicted RBP	2.6	□□□□□ -1.99
RDX-208	ENST00000530085	NYAP2	Q9P242	653 aa		2.6	□□□□□ -1.99
RDX-208	ENST00000530085	CROCC	Q5TZA2	2017 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	AQR	O60306	1485 aa	Known RBP eCLIP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	LAMC3	Q9Y6N6	1575 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	ARPC4-TTLL3	A0A0A6YYG9	625 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	NCBP2L	A6PVI3	153 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	GABRR3	A8MPY1	467 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF701	M0R085	212 aa	Predicted RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	OTC	P00480	354 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	KRT16	P08779	473 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	PSG2	P11465	335 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	PRPS2	P11908	318 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	CSNK2A2	P19784	350 aa	Predicted RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	U2AF2	P26368	475 aa	Known RBP eCLIP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	CD82	P27701	267 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	RFC3	P40938	356 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	GPR1	P46091	355 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	UBE2A	P49459	152 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	RCAN2	Q14206	197 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	RPEL1	Q2QD12	228 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	NKAIN1	Q4KMZ8	207 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	H3F3C	Q6NXT2	135 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	ARL9	Q6T311	187 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	FBXW12	Q6X9E4	464 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	MRPL21	Q7Z2W9	205 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	MRPL55	Q7Z7F7	128 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	CBLN2	Q8IUK8	224 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085		Q8N7P7	452 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	PROKR2	Q8NFJ6	384 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	APH1B	Q8WW43	257 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	ZNF75CP	Q92670	426 aa	Predicted RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	NAT6	Q93015	286 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	EXOSC8	Q96B26	276 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	CERS2	Q96G23	380 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	PARP12	Q9H0J9	701 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	PRSS16	Q9NQE7	514 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	FAM49B	Q9NUQ9	324 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	UVRAG	Q9P2Y5	699 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	DDX19B	Q9UMR2	479 aa		2.59	□□□□□ -1.99
RDX-208	ENST00000530085	YARS2	Q9Y2Z4	477 aa	Known RBP	2.59	□□□□□ -1.99
RDX-208	ENST00000530085	MN1	Q10571	1320 aa	Predicted RBP	2.59	□□□□□ -2
RDX-208	ENST00000530085	GTF3C1	Q12789	2109 aa		2.59	□□□□□ -2
RDX-208	ENST00000530085	KIF13A	Q9H1H9	1805 aa		2.58	□□□□□ -2
RDX-208	ENST00000530085	BAZ1B	Q9UIG0	1483 aa	Known RBP	2.58	□□□□□ -2
RDX-208	ENST00000530085	IGHV3-66	A0A0C4DH42	116 aa		2.58	□□□□□ -2
RDX-208	ENST00000530085		A6NDN8	102 aa		2.58	□□□□□ -2
RDX-208	ENST00000530085	C11orf94	C9JXX5	98 aa		2.58	□□□□□ -2
RDX-208	ENST00000530085	BOLA2-SMG1P6	H3BVE0	249 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms