RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 XCL2Q9UBD3 114 aa2.86□□□□□ -1.95
OTUD4-208ENST00000509620 CLCF1Q9UBD9 225 aa2.86□□□□□ -1.95
OTUD4-208ENST00000509620 SHPKQ9UHJ6 478 aa2.86□□□□□ -1.95
OTUD4-208ENST00000509620 GGA2Q9UJY4 613 aa2.86□□□□□ -1.95
OTUD4-208ENST00000509620 COL16A1Q07092 1604 aaPredicted RBP2.86□□□□□ -1.95
OTUD4-208ENST00000509620 PRRC2AP48634 2157 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 PRMT5O14744 637 aaPredicted RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 RAD51CO43502 376 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 GMDSO60547 372 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 ICOSLGO75144 302 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 ENTPD5O75356 428 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 VAPBO95292 243 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 PLEKHA8P1O95397 391 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 KLF8O95600 359 aaPredicted RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 ARG1P05089 322 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 PRPS2P11908 318 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 RBMXP38159 391 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 HTR2BP41595 481 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 KCNJ3P48549 501 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 RORCP51449 518 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CCR8P51685 355 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CLDN6P56747 220 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 TWF1Q12792 350 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 COTL1Q14019 142 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 PSG3Q16557 428 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 KCTD19Q17RG1 926 aaPredicted RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 LRRC10Q5BKY1 277 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CT45A1Q5HYN5 189 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 H2AFVQ71UI9 128 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 OR2W3Q7Z3T1 314 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 LRRC8AQ8IWT6 810 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 SYS1Q8N2H4 156 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 SNX31Q8N9S9 440 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 OR10R2Q8NGX6 335 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 OR51F2Q8NH61 342 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CT45A3Q8NHU0 189 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 SDR42E1Q8WUS8 393 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 MRGPRFQ96AM1 343 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 EEF1AKMT3Q96AZ1 226 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 RPUSD4Q96CM3 377 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 PIK3IP1Q96FE7 263 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 DNAJC1Q96KC8 554 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 ZNF317Q96PQ6 595 aaPredicted RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CYTH2Q99418 400 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 RASL11BQ9BPW5 248 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 LLPHQ9BRT6 129 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CHID1Q9BWS9 393 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 MAP1LC3CQ9BXW4 147 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 NDEL1Q9GZM8 345 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 NAA50Q9GZZ1 169 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CTPS2Q9NRF8 586 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 CCL28Q9NRJ3 127 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 UBAP1Q9NZ09 502 aa2.85□□□□□ -1.95
OTUD4-208ENST00000509620 NUFIP1Q9UHK0 495 aaKnown RBP2.85□□□□□ -1.95
OTUD4-208ENST00000509620 AQRO60306 1485 aaKnown RBP eCLIP2.84□□□□□ -1.951e-6■■■□□ 14.6
OTUD4-208ENST00000509620 RLFQ13129 1914 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 A0A0G2JN53 185 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 GJE1A6NN92 205 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ERVV-1B6SEH8 477 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 TRIM49D1C9J1S8 452 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 H3BNH8 94 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 CALUO43852 315 aaPredicted RBP2.84□□□□□ -1.95
OTUD4-208ENST00000509620 TDP2O95551 362 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 RPN2P04844 631 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 CSF3P09919 207 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 GKN3PP0CG01 181 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ZNF250P15622 560 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 NQO2P16083 231 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 PSMC3P17980 439 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 BGNP21810 368 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 IVDP26440 423 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 HTR2CP28335 458 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 IL12BP29460 328 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 UCNP55089 124 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 GNB2P62879 340 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 SLC25A11Q02978 314 aaKnown RBP2.84□□□□□ -1.95
OTUD4-208ENST00000509620 GGTLC2Q14390 218 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 CLINT1Q14677 625 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 PAGE3Q5JUK9 113 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 CLEC6AQ6EIG7 209 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ZNF621Q6ZSS3 439 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 LINC00336Q6ZUF6 198 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 TRMT10CQ7L0Y3 403 aaKnown RBP2.84□□□□□ -1.95
OTUD4-208ENST00000509620 RALGPS2Q86X27 583 aaPredicted RBP2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ERO1BQ86YB8 467 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 TMEM61Q8N0U2 210 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 VKORC1L1Q8N0U8 176 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ZADH2Q8N4Q0 377 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 LINC01555Q8NAE3 123 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 SUMF2Q8NBJ7 301 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 OR2A1Q8NGT9 310 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 OR2G3Q8NGZ4 309 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 ITFG1Q8TB96 612 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 DDI1Q8WTU0 396 aa2.84□□□□□ -1.95
OTUD4-208ENST00000509620 BAALCQ8WXS3 180 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms