RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ZNF367Q7RTV3 350 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 LIX1LQ8IVB5 337 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 C1orf174Q8IYL3 243 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 SPARTQ8N0X7 666 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 NANOGP1Q8N7R0 232 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 OR1J2Q8NGS2 313 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 ST7LQ8TDW4 575 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 RORBQ92753 470 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 ITFG2Q969R8 447 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 FBXO17Q96EF6 278 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 FOXN4Q96NZ1 517 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 OR8B4Q96RC9 309 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 DCLRE1CQ96SD1 692 aaKnown RBP9.66□□□□□ -0.86
HDLBP-242ENST00000488013 ATF6BQ99941 703 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 SH3GL3Q99963 347 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 OR2H1Q9GZK4 316 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 TRIM36Q9NQ86 728 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 PAK1IP1Q9NWT1 392 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-242ENST00000488013 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 IKZF2Q9UKS7 526 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
HDLBP-242ENST00000488013 MPDZO75970 2070 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 KALRNO60229 2985 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 APOL3O95236 402 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 GPANK1O95872 356 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 SERPINA5P05154 406 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 MMP7P09237 267 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-242ENST00000488013 H2BFMP0C1H6 154 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 LIMS3P0CW19 117 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 LIMS4P0CW20 117 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 CD79AP11912 226 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF32P17041 273 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 OPRL1P41146 370 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 NR1H2P55055 460 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 WNT4P56705 351 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF85Q03923 595 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 ACSM1Q08AH1 577 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 GPR50Q13585 617 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 SPHARQ15513 63 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF829Q3KNS6 432 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-242ENST00000488013 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 OR1F12Q8NHA8 337 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 SLAMF6Q96DU3 332 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 MOB1AQ9H8S9 216 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 CENPMQ9NSP4 180 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 BABAM2Q9NXR7 383 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 B3GNT2Q9NY97 397 aa9.65□□□□□ -0.86
HDLBP-242ENST00000488013 ALPK2Q86TB3 2170 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 J3QW42 95 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 RER1O15258 196 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 DOK2O60496 412 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 SEC14L2O76054 403 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 HLA-HP01893 362 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 MT-ND2P03891 347 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 SCG5P05408 212 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 CD53P19397 219 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TUBG1P23258 451 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 HSD11B1P28845 292 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TTKP33981 857 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 APLNRP35414 380 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TGM4P49221 684 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 RGS6P49758 472 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 GDI2P50395 445 aaKnown RBP9.64□□□□□ -0.87
HDLBP-242ENST00000488013 ETV1P50549 477 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 MMP16P51512 607 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 FOXG1P55316 489 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TPTEP56180 551 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 PSG4Q00888 419 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 EMX1Q04741 257 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-242ENST00000488013 FAM27E3Q08E93 113 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 PPA1Q15181 289 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 HIKESHIQ53FT3 197 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 PABPC1L2AQ5JQF8 200 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF684Q5T5D7 378 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 UBE2UQ5VVX9 321 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 CORO6Q6QEF8 472 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 DRAM2Q6UX65 266 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-242ENST00000488013 LINC00346Q8IVM7 164 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 YIPF7Q8N8F6 280 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 S100PBPQ96BU1 408 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 MAP6Q96JE9 813 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 C4orf36Q96KX1 117 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 COG8Q96MW5 612 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TBX5Q99593 518 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 KCNJ15Q99712 375 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 ZNF649Q9BS31 505 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 RHNO1Q9BSD3 238 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 ACOT13Q9NPJ3 140 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 TUBG2Q9NRH3 451 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 CRNNQ9UBG3 495 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-242ENST00000488013 GNG8Q9UK08 70 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 COPS3Q9UNS2 423 aa9.64□□□□□ -0.87
HDLBP-242ENST00000488013 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
HDLBP-242ENST00000488013 NBASA2RRP1 2371 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms