RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PRF1P14222 555 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 GDI2P50395 445 aaKnown RBP16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 IL5RAQ01344 420 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 POU4F2Q12837 409 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 ECH1Q13011 328 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 MAD2L1BPQ15013 274 aaPredicted RBP16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 CFAP77Q6ZQR2 320 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 DCXRQ7Z4W1 244 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 KBTBD8Q8NFY9 601 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 ST7LQ8TDW4 575 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 APH1BQ8WW43 257 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 MNTQ99583 582 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 PLEKHF2Q9H8W4 249 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 CDH20Q9HBT6 801 aa16.77■□□□□ 0.28
PCOLCE-208ENST00000487172 CADP27708 2225 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 UTP20O75691 2785 aaKnown RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 ATP6V1G2-DDX39BF2Z307 99 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 ICMTO60725 284 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 SBK2P0C263 348 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 PCSK6P29122 969 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 NAA10P41227 235 aaPredicted RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 HTR5AP47898 357 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 HSPA13P48723 471 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 HGFACQ04756 655 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF672Q499Z4 452 aaPredicted RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 NUP37Q8NFH4 326 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 OR10S1Q8NGN2 331 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 IPCEF1Q8WWN9 437 aaPredicted RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 DCLRE1CQ96SD1 692 aaKnown RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 CNN2Q99439 309 aaKnown RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 ABHD6Q9BV23 337 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 ADGRL4Q9HBW9 690 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 DDX28Q9NUL7 540 aaKnown RBP16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 AASSQ9UDR5 926 aa16.76■□□□□ 0.27
PCOLCE-208ENST00000487172 LYNP07948 512 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 CCL2P13500 99 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 ALOX5APP20292 161 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 NR4A1P22736 598 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 NUDT6P53370 316 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 NKX6-1P78426 367 aaPredicted RBP16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 EIF2B1Q14232 305 aaKnown RBP16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 KRTAP27-1Q3LI81 207 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 IZUMO2Q6UXV1 221 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 C8orf59Q8N0T1 100 aaPredicted RBP16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 PAQR4Q8N4S7 273 aaPredicted RBP16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 AKAP1Q92667 903 aaKnown RBP eCLIP16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 SLAMF6Q96DU3 332 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 ATF6BQ99941 703 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 SPEF1Q9Y4P9 236 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 TMEM14AQ9Y6G1 99 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 ABCA4P78363 2273 aa16.75■□□□□ 0.27
PCOLCE-208ENST00000487172 C5orf49A4QMS7 147 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 E7EQL1 145 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 HS3ST1O14792 307 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 WBP4O75554 376 aaKnown RBP16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 MRPL3P09001 348 aaKnown RBP16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 GNAO1P09471 354 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 GLRXP35754 106 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 MTNR1AP48039 350 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 GALK2Q01415 458 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 RSPO1Q2MKA7 263 aaPredicted RBP16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 TMEM154Q6P9G4 183 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 C1orf174Q8IYL3 243 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 OR51G2Q8NGK0 314 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 FBLIM1Q8WUP2 373 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 RNF133Q8WVZ7 376 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 CISD1Q9NZ45 108 aaKnown RBP16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 LAMP5Q9UJQ1 280 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 POU2F3Q9UKI9 436 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 ATP23Q9Y6H3 246 aa16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 RAI1Q7Z5J4 1906 aaPredicted RBP16.74■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF878C9JN71 531 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 PHYHO14832 338 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 CCNOP22674 350 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 OTX1P32242 354 aaPredicted RBP16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 RAD52P43351 418 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 UCP2P55851 309 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 C6orf52Q5T4I8 152 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF544Q6NX49 715 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 ARL9Q6T311 187 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 UNQ6126/PRO20091Q6UXV3 157 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 THAP5Q7Z6K1 395 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 SLC35F2Q8IXU6 374 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF611Q8N823 705 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 THEM6Q8WUY1 208 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 NEUROG1Q92886 237 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 FBXW5Q969U6 566 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 RNFT2Q96EX2 444 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 C4orf45Q96LM5 186 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 AMELYQ99218 206 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 KCNJ15Q99712 375 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 DHRS9Q9BPW9 319 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 BCL2L14Q9BZR8 327 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 ZNF442Q9H7R0 627 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 TBCCD1Q9NVR7 557 aa16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 MRPS18AQ9NVS2 196 aaKnown RBP16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 EIF3KQ9UBQ5 218 aaKnown RBP16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 EXOGQ9Y2C4 368 aaKnown RBP16.73■□□□□ 0.27
PCOLCE-208ENST00000487172 RTTNQ86VV8 2226 aa16.72■□□□□ 0.27
PCOLCE-208ENST00000487172 OR2T7P0C7T2 308 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms