RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 AQP11Q8NBQ7 271 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 SDR9C7Q8NEX9 313 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 OR52E2Q8NGJ4 325 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 OR8D4Q8NGM9 314 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 OR2T29Q8NH02 315 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 LRGUKQ96M69 825 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 RACGAP1Q9H0H5 632 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 POFUT1Q9H488 388 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 CHODLQ9H9P2 273 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 ZNF275Q9NSD4 429 aaPredicted RBP11□□□□□ -0.65
HDAC1-209ENST00000484305 NKIRAS2Q9NYR9 191 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 IL20Q9NYY1 176 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 SAMHD1Q9Y3Z3 626 aaKnown RBP11□□□□□ -0.65
HDAC1-209ENST00000484305 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 CDH10Q9Y6N8 788 aa11□□□□□ -0.65
HDAC1-209ENST00000484305 LOC100289279A0A1B0GTE1 492 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 OR6C6A6NF89 314 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 BHLHE40O14503 412 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 CDC14BO60729 498 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 RP2O75695 350 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 TFP02787 698 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 DBHP09172 617 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 RAP2AP10114 183 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 ARHGDIAP52565 204 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 MRPS11P82912 194 aaKnown RBP10.99□□□□□ -0.65
HDAC1-209ENST00000484305 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.99□□□□□ -0.65
HDAC1-209ENST00000484305 TRAP1Q12931 704 aaKnown RBP10.99□□□□□ -0.65
HDAC1-209ENST00000484305 TSTQ16762 297 aaKnown RBP10.99□□□□□ -0.65
HDAC1-209ENST00000484305 MICAQ29983 383 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 PCGF3Q3KNV8 242 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 HIST2H3PS2Q5TEC6 136 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 RPL13AP3Q6NVV1 102 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 CORO6Q6QEF8 472 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 RASSF6Q6ZTQ3 369 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 HIST2H3AQ71DI3 136 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 ZBTB46Q86UZ6 589 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 ADGRG5Q8IZF4 528 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 NPEPL1Q8NDH3 523 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 SLC26A10Q8NG04 563 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 OR52L1Q8NGH7 329 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 OR1F12Q8NHA8 337 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 SLC7A6OSQ96CW6 309 aaPredicted RBP10.99□□□□□ -0.65
HDAC1-209ENST00000484305 DDOQ99489 341 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 REEP1Q9H902 201 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 TBCCD1Q9NVR7 557 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 KLHL21Q9UJP4 597 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 POLR1DQ9Y2S0 133 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 STARD10Q9Y365 291 aa10.99□□□□□ -0.65
HDAC1-209ENST00000484305 ZSCAN5BA6NJL1 495 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 H3BSA7 217 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 WNT9BO14905 357 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 GYG2O15488 501 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 SPRY3O43610 288 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 LMX1BO60663 402 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TGFAP01135 160 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 IGHV1-46P01743 117 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 MT-ND5P03915 603 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 GPR6P46095 362 aaPredicted RBP10.98□□□□□ -0.65
HDAC1-209ENST00000484305 ZNF81P51508 661 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TMEM33P57088 247 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TEKQ02763 1124 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 COX10Q12887 443 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 PSG7Q13046 419 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 CCNIQ14094 377 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 CHRFAM7AQ494W8 412 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 ZNF362Q5T0B9 420 aaPredicted RBP10.98□□□□□ -0.65
HDAC1-209ENST00000484305 FAM166AQ6J272 317 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 PGM2L1Q6PCE3 622 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 LINC00346Q8IVM7 164 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 CYB561A3Q8NBI2 242 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 GJC3Q8NFK1 279 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 CANT1Q8WVQ1 401 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 POP5Q969H6 163 aaKnown RBP10.98□□□□□ -0.65
HDAC1-209ENST00000484305 CHID1Q9BWS9 393 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 DGCR6LQ9BY27 220 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 NARFLQ9H6Q4 476 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 MSL2Q9HCI7 577 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 DECR2Q9NUI1 292 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TBC1D23Q9NUY8 699 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
HDAC1-209ENST00000484305 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 SVEP1Q4LDE5 3571 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 IGHV1-69-2A0A0G2JMI3 117 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 PLSCR5A0PG75 271 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 TPD52L2O43399 206 aaKnown RBP10.97□□□□□ -0.65
HDAC1-209ENST00000484305 PPIHO43447 177 aaKnown RBP10.97□□□□□ -0.65
HDAC1-209ENST00000484305 SOX14O95416 240 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CST1P01037 141 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 GSTM3P21266 225 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 IGFBP5P24593 272 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CRYBB2P43320 205 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-209ENST00000484305 SPRNQ5BIV9 151 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 CFAP77Q6ZQR2 320 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 USP51Q70EK9 711 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 TMEM179BQ7Z7N9 219 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 LNX2Q8N448 690 aa10.97□□□□□ -0.65
HDAC1-209ENST00000484305 ZNRF4Q8WWF5 429 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms