RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FRG2BQ96QU4 278 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SIGLEC11Q96RL6 698 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 EFCAB11Q9BUY7 163 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 HSD3B7Q9H2F3 369 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 VCXQ9H320 206 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 GOLPH3Q9H4A6 298 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 RAD21L1Q9H4I0 556 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CNOT10Q9H9A5 744 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SLCO1C1Q9NYB5 712 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CLN8Q9UBY8 286 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 KLK5Q9Y337 293 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CAB39Q9Y376 341 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 FLVCR1Q9Y5Y0 555 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 COMMD3-BMI1R4GMX3 469 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 IGLV3-9A0A075B6K5 115 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 A0A1W2PPL8 197 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 H3BSH0 61 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 NPFFO15130 113 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TAPBPO15533 448 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SPOPO43791 374 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 UPK3AO75631 287 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TUSC2O75896 110 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 NUDT14O95848 222 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SPARCP09486 303 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CCL2P13500 99 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CPA3P15088 417 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF250P15622 560 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM11P17152 192 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 NTSP30990 170 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CTNNA1P35221 906 aaKnown RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SAA4P35542 130 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 HTR5AP47898 357 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF75DP51815 510 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ARFIP1P53367 373 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ALDH18A1P54886 795 aaKnown RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TIRAPP58753 221 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 VBP1P61758 197 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ELF3P78545 371 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SELENBP1Q13228 472 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CD226Q15762 336 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 DECR1Q16698 335 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 FBXO48Q5FWF7 155 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM255AQ5JRV8 349 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 PRAMEF8Q5VWM4 474 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 PRAMEF7Q5VXH5 474 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 AADACL2Q6P093 401 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SLC48A1Q6P1K1 146 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CYP20A1Q6UW02 462 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF841Q6ZN19 808 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 AAED1Q7RTV5 226 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 PRUNE1Q86TP1 453 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 AKAP14Q86UN6 197 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CCNYL1Q8N7R7 359 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 OR7G3Q8NG95 312 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 OR8B3Q8NGG8 313 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 HUS1BQ8NHY5 278 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 OSR1Q8TAX0 266 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 PIFOQ8TCI5 191 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CNRIP1Q96F85 164 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 CEP19Q96LK0 163 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 ALKBH3Q96Q83 286 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 OR8B2Q96RD0 313 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM246Q9BRR3 403 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 DESI2Q9BSY9 194 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 MRPL1Q9BYD6 325 aaKnown RBP3.85□□□□□ -1.79
SDCBP-205ENST00000447267 EGLN1Q9GZT9 426 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 IL22Q9GZX6 179 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 GHITMQ9H3K2 345 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 VIPAS39Q9H9C1 493 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 RAB18Q9NP72 206 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 C20orf141Q9NUB4 165 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 SENP1Q9P0U3 644 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 MBD2Q9UBB5 411 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 MIOXQ9UGB7 285 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 BAIAP2L1Q9UHR4 511 aa3.85□□□□□ -1.79
SDCBP-205ENST00000447267 NUP214P35658 2090 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GXYLT2A0PJZ3 443 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SYCE1LA8MT33 242 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF587BE7ETH6 402 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 STX16-NPEPL1H3BU86 382 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 FBP2O00757 339 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 TSC22D2O75157 780 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 BCAS2O75934 225 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SERPING1P05155 500 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 LCKP06239 509 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 APRTP07741 180 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 NGFRP08138 427 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SNRPAP09012 282 aaKnown RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CD79AP11912 226 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GP9P14770 177 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CSNK2A2P19784 350 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-205ENST00000447267 M6PRP20645 277 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 GABRB3P28472 473 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CRABP2P29373 138 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SERPINB1P30740 379 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 SOX6P35712 828 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 FDFT1P37268 417 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 CRATP43155 626 aa3.84□□□□□ -1.79
SDCBP-205ENST00000447267 HNMTP50135 292 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms