RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KRCC1Q9NPI7 259 aaPredicted RBP17.79■□□□□ 0.44
VSX1-206ENST00000444511 NRIP3Q9NQ35 241 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 TMEM106BQ9NUM4 274 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 DCAF16Q9NXF7 216 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 NDUFAF4Q9P032 175 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 EGFL7Q9UHF1 273 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 COA3Q9Y2R0 106 aaPredicted RBP17.79■□□□□ 0.44
VSX1-206ENST00000444511 STARD10Q9Y365 291 aa17.79■□□□□ 0.44
VSX1-206ENST00000444511 TRIM77I1YAP6 450 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 SOCS2O14508 198 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 SBK2P0C263 348 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 RHCEP18577 417 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 TNFRSF1AP19438 455 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 KITLGP21583 273 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 LSM6P62312 80 aaKnown RBP17.78■□□□□ 0.44
VSX1-206ENST00000444511 ADCK1Q86TW2 530 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 SLC7A6Q92536 515 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 CMTM5Q96DZ9 223 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 SAMD8Q96LT4 415 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 GPX7Q96SL4 187 aaPredicted RBP17.78■□□□□ 0.44
VSX1-206ENST00000444511 SUCNR1Q9BXA5 334 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 VSX1Q9NZR4 365 aaPredicted RBP17.78■□□□□ 0.44
VSX1-206ENST00000444511 ABCD2Q9UBJ2 740 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 AURKCQ9UQB9 309 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 POLR1DQ9Y2S0 133 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 IER3IP1Q9Y5U9 82 aa17.78■□□□□ 0.44
VSX1-206ENST00000444511 TRBV4-1A0A0J9YWV2 114 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 SURF4O15260 269 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 GMNNO75496 209 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 FOXH1O75593 365 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 IGHV2-70P01814 119 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 OMPP47874 163 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 HNRNPA0Q13151 305 aaKnown RBP17.77■□□□□ 0.44
VSX1-206ENST00000444511 KRT72Q14CN4 511 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 GLYATQ6IB77 296 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 Q6ZR03 302 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 BPIFB2Q8N4F0 458 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 SPICQ8N5J4 248 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 OR1F12Q8NHA8 337 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 HAVCR1Q96D42 359 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 NUAK2Q9H093 628 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 SPAG4Q9NPE6 437 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 MED4Q9NPJ6 270 aa17.77■□□□□ 0.44
VSX1-206ENST00000444511 SAMD4AQ9UPU9 718 aaKnown RBP17.77■□□□□ 0.44
VSX1-206ENST00000444511 OR6C6A6NF89 314 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 UNC119BA6NIH7 251 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 IMPA2O14732 288 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 CENPAP49450 140 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 RPS6KA3P51812 740 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 DPY19L2P2Q6ZN68 376 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 PTP4A1Q93096 173 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 SLC6A7Q99884 636 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 DCAF13Q9NV06 445 aaKnown RBP17.76■□□□□ 0.43
VSX1-206ENST00000444511 ADA2Q9NZK5 511 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 IL19Q9UHD0 177 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 PPP1R3CQ9UQK1 317 aa17.76■□□□□ 0.43
VSX1-206ENST00000444511 RER1O15258 196 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 DIRAS1O95057 198 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 RAC2P15153 192 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 RGS6P49758 472 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 SEC23BQ15437 767 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 CCDC92Q53HC0 331 aaPredicted RBP17.75■□□□□ 0.43
VSX1-206ENST00000444511 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 PTCHD4Q6ZW05 846 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.75■□□□□ 0.43
VSX1-206ENST00000444511 ZNF283Q8N7M2 679 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 OR52J3Q8NH60 311 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 FAM216AQ8WUB2 273 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 ITLN1Q8WWA0 313 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 GCDHQ92947 438 aaPredicted RBP17.75■□□□□ 0.43
VSX1-206ENST00000444511 C7orf34Q96L11 122 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 RBM4Q9BWF3 364 aaKnown RBP17.75■□□□□ 0.43
VSX1-206ENST00000444511 OPN4Q9UHM6 478 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 ATPIF1Q9UII2 106 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 NBEAL1Q6ZS30 2694 aa17.75■□□□□ 0.43
VSX1-206ENST00000444511 PPIAL4EA0A075B759 164 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 PPIAL4CA0A0B4J2A2 164 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 PPIAL4DF5H284 164 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 J3QW42 95 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 TXNDC12O95881 172 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 DBHP09172 617 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 PPIAL4FP0DN26 164 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 FPR2P25090 351 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 ZFP36P26651 326 aaKnown RBP17.74■□□□□ 0.43
VSX1-206ENST00000444511 CFPP27918 469 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 CRABP1P29762 137 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 CDKN2AP42771 156 aaKnown RBP17.74■□□□□ 0.43
VSX1-206ENST00000444511 ERFP50548 548 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 FXYD6P3P58550 94 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 KCNMB1Q16558 191 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 TMEM155Q4W5P6 130 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 PGM2L1Q6PCE3 622 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 SMARCD3Q6STE5 483 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 OR5AS1Q8N127 324 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 RNF148Q8N7C7 305 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 FAM86B1Q8N7N1 296 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 ATG16L2Q8NAA4 619 aa17.74■□□□□ 0.43
VSX1-206ENST00000444511 OR5L1Q8NGL2 311 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms