RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PSTPIP1O43586 416 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 NDUFS6O75380 124 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR7A10O76100 309 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 BRI3O95415 125 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 UBTFL1P0CB47 393 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCL2P13500 99 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CD82P27701 267 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 RORAP35398 523 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 NBL1P41271 181 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 RAB10P61026 200 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CDH17Q12864 832 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 TTLL9Q3SXZ7 439 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 VPS26BQ4G0F5 336 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 KRTAP13-2Q52LG2 175 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 C6orf183Q5T699 404 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 PDPK2PQ6A1A2 396 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 C22orf42Q6IC83 251 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF836Q6ZNA1 936 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 FAM92BQ6ZTR7 304 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MRPL21Q7Z2W9 205 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MMAAQ8IVH4 418 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MNS1Q8NEH6 495 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR56A4Q8NGH8 313 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR51L1Q8NGJ5 315 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR4A4PQ8NGN8 299 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 C8orf44Q96CB5 159 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CXorf40BQ96DE9 158 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 NRBF2Q96F24 287 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 DUS3LQ96G46 650 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MSANTD3Q96H12 275 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MS4A4EQ96PG1 132 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 ATP5SQ99766 215 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 BBS2Q9BXC9 721 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 GABARAPL3Q9BY60 117 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 GAL3ST2Q9H3Q3 398 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 NIPAL2Q9H841 368 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 MYEF2Q9P2K5 600 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CTSFQ9UBX1 484 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 LSM7Q9UK45 103 aaKnown RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 POFUT2Q9Y2G5 429 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 C15orf41Q9Y2V0 281 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 CARMIL3Q8ND23 1372 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 BRWD3Q6RI45 1802 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 TUBGCP6Q96RT7 1819 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 KCNE1BA0A087WTH5 132 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 TRBV9A0A0B4J1U6 114 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 KBTBD11-OT1A0A1B0GTJ5 212 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF705GA8MUZ8 300 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 SERPINE3A8MV23 424 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 POLR1CO15160 346 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 GMDSO60547 372 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZDHHC11BP0C7U3 371 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 MUC1P15941 1255 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 PGAM1P18669 254 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 EIF2S2P20042 333 aaKnown RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 VHLP40337 213 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCNG1P51959 295 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 UBE2MP61081 183 aaKnown RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC7A9P82251 487 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 AQP6Q13520 282 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPR176Q14439 515 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 DGUOKQ16854 277 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZBED5Q49AG3 693 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 REEP3Q6NUK4 255 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 NDUFAF7Q7L592 441 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 COPS6Q7L5N1 327 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC16A14Q7RTX9 510 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ERO1BQ86YB8 467 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FAM9CQ8IZT9 166 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 CMTM8Q8IZV2 173 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 PGAM4Q8N0Y7 254 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FAM58AQ8N1B3 248 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 LYPD1Q8N2G4 141 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FBXL13Q8NEE6 735 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR2A5Q96R48 311 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF2Q9BSG1 426 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 HINT2Q9BX68 163 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FRMD8P1Q9BZ68 369 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 BEX1Q9HBH7 125 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FGF20Q9NP95 211 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 ADAP2Q9NPF8 381 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPATCH2LQ9NWQ4 482 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 CLN8Q9UBY8 286 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 GGA2Q9UJY4 613 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 FANCIQ9NVI1 1328 aa2.3□□□□□ -2.04
HMGB1P49-201ENST00000418882 IGHV5-51A0A0C4DH38 117 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 IGHV3-66A0A0C4DH42 116 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CIB4A0PJX0 185 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 H0YHG0 523 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 GOSR2O14653 212 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 TOM1O60784 492 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 FCN3O75636 299 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CBR3O75828 277 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 CD160O95971 181 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF24P17028 368 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 HTR2BP41595 481 aa2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPR6P46095 362 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P49-201ENST00000418882 TMED10P49755 219 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms