RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FNDC11Q9BVV2 318 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ALOXE3Q9BYJ1 711 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 AICDAQ9GZX7 198 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PCBD2Q9H0N5 130 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RGCCQ9H4X1 137 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 KAT8Q9H7Z6 458 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DDX31Q9H8H2 851 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RNF122Q9H9V4 155 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PELI2Q9HAT8 420 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DNAJC4Q9NNZ3 241 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 TUBG2Q9NRH3 451 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DUSP22Q9NRW4 184 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SDHAF2Q9NX18 166 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 IMPAD1Q9NX62 359 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ANKRD10Q9NXR5 420 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PPP4R1LQ9P1A2 415 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PHF11Q9UIL8 331 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 EMCNQ9ULC0 261 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ABCG2Q9UNQ0 655 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SLC6A5Q9Y345 797 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HSPB11Q9Y547 144 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 CACNA1GO43497 2377 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HEATR5BQ9P2D3 2071 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ATRXP46100 2492 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PIEZO2Q9H5I5 2752 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 GABRR3A8MPY1 467 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 B4DXG7 233 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 C21orf140B9A014 251 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SGK494L7N484 410 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 AIPO00170 330 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SAP18O00422 153 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TCAPO15273 167 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 FCMRO60667 390 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SRPX2O60687 465 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 HCN1O60741 890 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 GLRA3O75311 464 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 KLF7O75840 302 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RAB3DO95716 219 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TBX6O95947 436 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LALBAP00709 142 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LDLRP01130 860 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 HLA-DQB1P01920 261 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PRB1P04280 392 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 ALPLP05186 524 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 CHRNGP07510 517 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 UMODP07911 640 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RNASE1P07998 156 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 HCKP08631 526 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 IGFBP1P08833 259 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SLC35G6P0C7Q6 338 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR2T7P0C7T2 308 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 STAG3L2P0CL84 134 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 C1GALT1C1LP0DN25 315 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF44P15621 663 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MYL9P24844 172 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 HRH2P25021 359 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 UCP1P25874 307 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 FOLR3P41439 243 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PTGFRP43088 359 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 ALDH3B1P43353 468 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 CDX1P47902 265 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 EFNA3P52797 238 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RAB8AP61006 207 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 BTG1P62324 171 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RPS15P62841 145 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SKP1P63208 163 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 DEFA6Q01524 100 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 IRF8Q02556 426 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RASGEF1BQ0VAM2 473 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PMPCAQ10713 525 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TRAF3Q13114 568 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 IL18R1Q13478 541 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 GTF2H2Q13888 395 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LY6DQ14210 128 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 SMCO1Q147U7 214 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 RBBP7Q16576 425 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MEP1AQ16819 746 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 DEFB134Q4QY38 66 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 VWA2Q5GFL6 755 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 NHLRC3Q5JS37 347 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LGSNQ5TDP6 509 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MFSD12Q6NUT3 480 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 GTF2H2CQ6P1K8 395 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 PCSK4Q6UW60 755 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 EPGNQ6UW88 154 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 TMIGD1Q6UXZ0 262 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 EIF3MQ7L2H7 374 aaKnown RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 VTCN1Q7Z7D3 282 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 MRGPREQ86SM8 312 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 LRRC75A-AS1Q8N1F1 130 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 CBR4Q8N4T8 237 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 C12orf45Q8N5I9 185 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR4K1Q8NGD4 311 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR52B6Q8NGF0 335 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR5T3Q8NGG3 340 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR56A1Q8NGH5 318 aa4.06□□□□□ -1.76
SF3B1-202ENST00000409915 OR52N2Q8NGI0 321 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms