RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SNX5Q9Y5X3 404 aa7.8□□□□□ -1.16
BRCC3-206ENST00000399042 PCNX1Q96RV3 2341 aa7.8□□□□□ -1.16
BRCC3-206ENST00000399042 ARPC4-TTLL3A0A0A6YYG9 625 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 C5orf49A4QMS7 147 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 F5H5K5 113 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 PSMD9O00233 223 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 RGS10O43665 173 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 KRT8P05787 483 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TACSTD2P09758 323 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 CCDC159P0C7I6 412 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 CBR1P16152 277 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 STOMP27105 288 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 DCKP27707 260 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 CXCR4P61073 352 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 PSG4Q00888 419 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ENDOGQ14249 297 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 GGTLC2Q14390 218 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 RAB35Q15286 201 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TBC1D28Q2M2D7 210 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TEX30Q5JUR7 227 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ELFN2Q5R3F8 820 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF544Q6NX49 715 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF322Q6U7Q0 402 aaPredicted RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TMPRSS11AQ6ZMR5 421 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 PLEKHG7Q6ZR37 379 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 FOXL2NBQ6ZUU3 175 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF627Q7L945 461 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 CDC20BQ86Y33 519 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 YIPF7Q8N8F6 280 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 SLC30A7Q8NEW0 376 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 OR52I1Q8NGK6 324 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 OR1F12Q8NHA8 337 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 OTOSQ8NHW6 89 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 SLAMF6Q96DU3 332 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 DACH2Q96NX9 599 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ABHD6Q9BV23 337 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 YTHDF1Q9BYJ9 559 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 HDHD2Q9H0R4 259 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ESRP2Q9H6T0 727 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 INPP5EQ9NRR6 644 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 UBAP1Q9NZ09 502 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 CNOT2Q9NZN8 540 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 GNG8Q9UK08 70 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 POU2F3Q9UKI9 436 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 ERGIC3Q9Y282 383 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 EXOSC1Q9Y3B2 195 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 GRIP1Q9Y3R0 1128 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 KLF2Q9Y5W3 355 aaPredicted RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 SLC25A15Q9Y619 301 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 LHFPL6Q9Y693 200 aa7.79□□□□□ -1.16
BRCC3-206ENST00000399042 PHF3Q92576 2039 aaKnown RBP7.79□□□□□ -1.16
BRCC3-206ENST00000399042 A0A1W2PQL4 384 aaPredicted RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 OR6C6A6NF89 314 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 VSTM5A8MXK1 200 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF878C9JN71 531 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 J3QLW9 94 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 MYL12BO14950 172 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 RPP14O95059 124 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 CRYAAP02489 173 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 APOC1P02654 83 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 SERPINA5P05154 406 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ANXA2P07355 339 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 SNRPBP14678 240 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 COX6B1P14854 86 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ZNF19P17023 458 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 APEX1P27695 318 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 CHN2P52757 468 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 RIDAP52758 137 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 TPTEP56180 551 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ACTA2P62736 377 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ACTG2P63267 376 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 C1QTNF12Q5T7M4 302 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 SLC22A25Q6T423 547 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 LRRN1Q6UXK5 716 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 UNQ6126/PRO20091Q6UXV3 157 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 LHFPL3Q86UP9 236 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 IL17RDQ8NFM7 739 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 FGFBP3Q8TAT2 258 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ATF6BQ99941 703 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ALG8Q9BVK2 526 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 SP140LQ9H930 580 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 MARCH7Q9H992 704 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ELOVL3Q9HB03 270 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 VCX3AQ9NNX9 186 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 BRD7Q9NPI1 651 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 PLCXD1Q9NUJ7 323 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 PSORS1C1Q9UIG5 152 aa7.78□□□□□ -1.16
BRCC3-206ENST00000399042 EXOGQ9Y2C4 368 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 INTS1Q8N201 2190 aaKnown RBP7.78□□□□□ -1.16
BRCC3-206ENST00000399042 ARHGAP21Q5T5U3 1957 aa7.77□□□□□ -1.17
BRCC3-206ENST00000399042 HIVEP3Q5T1R4 2406 aa7.77□□□□□ -1.17
BRCC3-206ENST00000399042 WIPF3A6NGB9 483 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms