RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 H3BSA7 217 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 SMAD7O15105 426 aaKnown RBP16.49■□□□□ 0.23
SYNE4-202ENST00000340477 RER1O15258 196 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF250P15622 560 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 WNT5AP41221 380 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 PDLIM4P50479 330 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 PPP1CBP62140 327 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 TNK1Q13470 666 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 GINS1Q14691 196 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 ELFN2Q5R3F8 820 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 OTPQ5XKR4 325 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 OR6K6Q8NGW6 343 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 FAM168AQ92567 244 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 COX4I2Q96KJ9 171 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 DCLRE1CQ96SD1 692 aaKnown RBP16.49■□□□□ 0.23
SYNE4-202ENST00000340477 PITX2Q99697 317 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 COQ7Q99807 217 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 RBM4Q9BWF3 364 aaKnown RBP16.49■□□□□ 0.23
SYNE4-202ENST00000340477 NTN4Q9HB63 628 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 DLL4Q9NR61 685 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 KRT84Q9NSB2 600 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 LHFPL6Q9Y693 200 aa16.49■□□□□ 0.23
SYNE4-202ENST00000340477 TMEM129A0AVI4 362 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ICMTO60725 284 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 TFP02787 698 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 SPI1P17947 270 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 TUBG1P23258 451 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 RGS6P49758 472 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ACTR3P61158 418 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ERVS71-1P61550 626 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ECH1Q13011 328 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 CARTPTQ16568 116 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ZFP1Q6P2D0 407 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 CORO6Q6QEF8 472 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 RFPL4BQ6ZWI9 263 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 LINC00346Q8IVM7 164 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF101Q8IZC7 436 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF525Q8N782 197 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 TUBG2Q9NRH3 451 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 TAAR3PQ9P1P4 343 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 GRIP1Q9Y3R0 1128 aa16.48■□□□□ 0.23
SYNE4-202ENST00000340477 PRR23D1E9PI22 279 aaPredicted RBP16.47■□□□□ 0.23
SYNE4-202ENST00000340477 GYPBP06028 91 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 PRR23D2P0DMB1 279 aaPredicted RBP16.47■□□□□ 0.23
SYNE4-202ENST00000340477 SLC25A16P16260 332 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 ALDH3B1P43353 468 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 KPNB1Q14974 876 aaKnown RBP16.47■□□□□ 0.23
SYNE4-202ENST00000340477 MSMPQ1L6U9 139 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 CCDC92Q53HC0 331 aaPredicted RBP16.47■□□□□ 0.23
SYNE4-202ENST00000340477 SPATA46Q5T0L3 261 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 SLC18B1Q6NT16 456 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 FAHD1Q6P587 224 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 TMEM154Q6P9G4 183 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 AMIGO2Q86SJ2 522 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 LRP11Q86VZ4 500 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 PARP8Q8N3A8 854 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 OR51L1Q8NGJ5 315 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 SLC25A40Q8TBP6 338 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 CENPNQ96H22 339 aaPredicted RBP16.47■□□□□ 0.23
SYNE4-202ENST00000340477 DDOQ99489 341 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 TPK1Q9H3S4 243 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 TBCCD1Q9NVR7 557 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 CYB5R1Q9UHQ9 305 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 ACANP16112 2415 aa16.47■□□□□ 0.23
SYNE4-202ENST00000340477 IGLV3-9A0A075B6K5 115 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 PLSCR5A0PG75 271 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 TVP23AA6NH52 213 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 RNF223E7ERA6 249 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 J3QW42 95 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 NDUFS8O00217 210 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 SPARCP09486 303 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 ENTPD1P49961 510 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 ESRRGP62508 458 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 HIST1H3AP68431 136 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 MAD2L1BPQ15013 274 aaPredicted RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 ZMAT1Q5H9K5 638 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF362Q5T0B9 420 aaPredicted RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 HIST2H3PS2Q5TEC6 136 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 HIST2H3AQ71DI3 136 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 OR5L1Q8NGL2 311 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 PYDC1Q8WXC3 89 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 ATF6BQ99941 703 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 REG4Q9BYZ8 158 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 NMNAT2Q9BZQ4 307 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 OR2J1Q9GZK6 312 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 GABARAPL1Q9H0R8 117 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 SLC25A19Q9HC21 320 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 HINT3Q9NQE9 182 aaKnown RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 MRPL22Q9NWU5 206 aaKnown RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 MYEF2Q9P2K5 600 aaKnown RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 CGGBP1Q9UFW8 167 aaPredicted RBP16.46■□□□□ 0.23
SYNE4-202ENST00000340477 COMMD3-BMI1R4GMX3 469 aa16.46■□□□□ 0.23
SYNE4-202ENST00000340477 LOC390937A0A1W2PQ73 354 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 LY6HO94772 140 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 CLPTM1O96005 669 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 IGHV3-13P01766 116 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 DAOP14920 347 aa16.45■□□□□ 0.22
SYNE4-202ENST00000340477 GGT2P36268 569 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms