RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ASB6Q9NWX5 421 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TXNL4BQ9NX01 149 aaKnown RBP11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 MGAT4AQ9UM21 535 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 NPIPA1Q9UND3 350 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 MOKQ9UQ07 419 aa11.34□□□□□ -0.59
DDX39A-202ENST00000324340 TMEM8BA6NDV4 472 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF716A6NP11 495 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 TSPAN4O14817 238 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 CYTIPO60759 359 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 GLCEO94923 617 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 RAB36O95755 333 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 IGHA1P01876 353 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF43P17038 809 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-202ENST00000324340 EIF1AXP47813 144 aaKnown RBP11.33□□□□□ -0.6
DDX39A-202ENST00000324340 SLC16A1P53985 500 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 CXADRP78310 365 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 POU4F2Q12837 409 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 HNRNPA0Q13151 305 aaKnown RBP11.33□□□□□ -0.6
DDX39A-202ENST00000324340 MELKQ14680 651 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 PON3Q15166 354 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 PLA1AQ53H76 456 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 UTS2BQ765I0 119 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 OR2T4Q8NH00 348 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 OR6X1Q8NH79 312 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ZNRF4Q8WWF5 429 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
DDX39A-202ENST00000324340 OTULINQ96BN8 352 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ADAD1Q96M93 576 aaKnown RBP11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ALG12Q9BV10 488 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 ACTR6Q9GZN1 396 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 SYT4Q9H2B2 425 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 GHITMQ9H3K2 345 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 MED29Q9NX70 200 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 SPRR3Q9UBC9 169 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 SCP2D1Q9UJQ7 156 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 TP53TG5Q9Y2B4 290 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 NUBP2Q9Y5Y2 271 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 NPTNQ9Y639 398 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 APC2O95996 2303 aa11.33□□□□□ -0.6
DDX39A-202ENST00000324340 SPTBN2O15020 2390 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 IGHV3-15A0A0B4J1V0 119 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 SLC22A23A1A5C7 686 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 H7C1C5 153 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 DCTN6O00399 190 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 AQP7O14520 342 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 GYPBP06028 91 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 NAT2P11245 290 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 CALCRP30988 508 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 CENPAP49450 140 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 BIDP55957 195 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 LCN6P62502 163 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 DHODHQ02127 395 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 EXOSC2Q13868 293 aaKnown RBP11.32□□□□□ -0.6
DDX39A-202ENST00000324340 LINC00303Q3SY05 128 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 PLEKHN1Q494U1 663 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-202ENST00000324340 KRT74Q7RTS7 529 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 FGD2Q7Z6J4 655 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 WDFY1Q8IWB7 410 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 OR6V1Q8N148 313 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 ZIC4Q8N9L1 334 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 POMGNT2Q8NAT1 580 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 OR9K2Q8NGE7 335 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 OR52H1Q8NGJ2 320 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-202ENST00000324340 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF845Q96IR2 970 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-202ENST00000324340 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-202ENST00000324340 ADGRL4Q9HBW9 690 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 PCDHB16Q9NRJ7 776 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 KCNK7Q9Y2U2 307 aa11.32□□□□□ -0.6
DDX39A-202ENST00000324340 CNTRLQ7Z7A1 2325 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 TRDV1A0A1B0GX56 115 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 A0A1W2PPL8 197 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 MFSD2BA6NFX1 497 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 NPIPA2E9PIF3 369 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 NPIPA3F8WFD2 350 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 SCO1O75880 301 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 SBK2P0C263 348 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 PGA4P0DJD7 388 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 PGA3P0DJD8 388 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 FOSL1P15407 271 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 CRABP1P29762 137 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 RPS7P62081 194 aaKnown RBP11.31□□□□□ -0.6
DDX39A-202ENST00000324340 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-202ENST00000324340 HIST3H3Q16695 136 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 B3GLCTQ6Y288 498 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 FCRLAQ7L513 359 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 HSD17B13Q7Z5P4 300 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-202ENST00000324340 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 OR4F15Q8NGB8 312 aa11.31□□□□□ -0.6
DDX39A-202ENST00000324340 OR51G2Q8NGK0 314 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms