RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 AKAP12Q02952 1782 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 MYO16Q9Y6X6 1858 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 C9orf172C9J069 976 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 J3KRW8 73 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 OR5AL1P0C617 328 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 PRSS56P0CW18 603 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CYB561P49447 251 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 HAGHQ16775 308 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 KIAA2026Q5HYC2 2103 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 SYT9Q86SS6 491 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 C19orf47Q8N9M1 422 aaKnown RBP11.08□□□□□ -0.64
PCF11-201ENST00000298281 CA5BP1Q8WTZ4 195 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 LYSMD1Q96S90 227 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 FBXL2Q9UKC9 423 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ACOT6Q3I5F7 207 aaPredicted RBP11.08□□□□□ -0.64
PCF11-201ENST00000298281 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 YIPF5Q969M3 257 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 TOX2Q96NM4 488 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 PDLIM7Q9NR12 457 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
PCF11-201ENST00000298281 CNMDO75829 334 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 FBP1P09467 338 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CRISP2P16562 243 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 CACNG7P62955 275 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 FOXC1Q12948 553 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 ZNF260Q3ZCT1 412 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
PCF11-201ENST00000298281 TMEM218A2RU14 115 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 AQP9O43315 295 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 MFAP5Q13361 173 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TMEM207Q6UWW9 146 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 ZNF788Q6ZQV5 615 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 POFUT1Q9H488 388 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 PHRF1Q9P1Y6 1649 aaKnown RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 H0YGG7 62 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 PLAUP00749 431 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 DEFB109BQ30KR1 87 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TTC9BQ8N6N2 239 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 UBTD2Q8WUN7 234 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 FBXO8Q9NRD0 319 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 A0A1B0GTQ1 180 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TMEM221A6NGB7 291 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 M0R3E3 92 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 PDGFAP04085 211 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 PPP3CBP16298 524 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 SLC6A12P48065 614 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 OR52A1Q9UKL2 312 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 GABRPO00591 440 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 FZD7O75084 574 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 NEURL1O76050 574 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 CR2P20023 1033 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 BMP5P22003 454 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 HBA1P69905 142 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 ZNF252P-AS1Q0IIN9 211 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 FCRLAQ7L513 359 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 WDR76Q9H967 626 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 MOB4Q9Y3A3 225 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 SYT5O00445 386 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 NCR1O76036 304 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 RPE65Q16518 533 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 SLC5A12Q1EHB4 618 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 DRAM2Q6UX65 266 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TRILQ7L0X0 811 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 REC114Q7Z4M0 266 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TTC9Q92623 222 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 SGK494Q96LW2 274 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 DNAJC25-GNG10A0A024R161 153 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 H3BNC9 293 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 AIFM1O95831 613 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 CNR1P21554 472 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 RTL8AQ9BWD3 113 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
PCF11-201ENST00000298281 TAF9BQ9HBM6 251 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 C1GALT1Q9NS00 363 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 ARFGEF2Q9Y6D5 1785 aa11.07□□□□□ -0.64
PCF11-201ENST00000298281 TRAV36DV7A0A075B6V5 113 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 PTGER1P34995 402 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MAP2K6P52564 334 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 WDR88Q6ZMY6 472 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 SLC22A24Q8N4F4 322 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 RLN3Q8WXF3 142 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 CMBLQ96DG6 245 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 ATOH8Q96SQ7 321 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 SORT1Q99523 831 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MYADML2A6NDP7 307 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 PDGFBP01127 241 aaPredicted RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 ZNF154Q13106 437 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms