RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 DNAJA3Q96EY1 480 aa22.39■■□□□ 1.17
ROM1-201ENST00000278833 SLC25A21Q9BQT8 299 aaPredicted RBP22.39■■□□□ 1.17
ROM1-201ENST00000278833 NUDT22Q9BRQ3 303 aa22.39■■□□□ 1.17
ROM1-201ENST00000278833 DUSP15Q9H1R2 295 aaPredicted RBP22.39■■□□□ 1.17
ROM1-201ENST00000278833 SUSD2Q9UGT4 822 aa22.39■■□□□ 1.17
ROM1-201ENST00000278833 GTF2A1LQ9UNN4 478 aa22.39■■□□□ 1.17
ROM1-201ENST00000278833 LIPT2A6NK58 231 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 MCRIP1C9JLW8 97 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 CXCL2P19875 107 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 DNASE1L1P49184 302 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 FBXW4P57775 412 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 PHF19Q5T6S3 580 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 DCXRQ7Z4W1 244 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 MDGA2Q7Z553 956 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 OR4D10Q8NGI6 311 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 PPP1R14AQ96A00 147 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 MRGPRX4Q96LA9 322 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 GSX2Q9BZM3 304 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 CHIAQ9BZP6 476 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 FAM86C1Q9NVL1 165 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 EMC9Q9Y3B6 208 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 B3GALT1Q9Y5Z6 326 aa22.38■■□□□ 1.17
ROM1-201ENST00000278833 TEX51A0A1B0GUA7 166 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 ALOX12BO75342 701 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 TOXO94900 526 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 CRYZL1O95825 349 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 NFYAP23511 347 aaPredicted RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 OR7A5Q15622 319 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 WDR45BQ5MNZ6 344 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 GLYATL3Q5SZD4 288 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 OR51S1Q8NGJ8 323 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 CCDC107Q8WV48 283 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 ELMOD3Q96FG2 381 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 GPR179Q6PRD1 2367 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 L7N2F9 121 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 ZNF354AO60765 605 aaPredicted RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 MPZL1O95297 269 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 CFDP00746 253 aaPredicted RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 FBXO45P0C2W1 286 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 RRASP10301 218 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 MPZP25189 248 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 OTPQ5XKR4 325 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 B3GNTL1Q67FW5 361 aaPredicted RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 OR5M10Q6IEU7 315 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 ARL5BQ96KC2 179 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 NUDT16L1Q9BRJ7 211 aaKnown RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 KCNK15Q9H427 330 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 MED9Q9NWA0 146 aa22.37■■□□□ 1.17
ROM1-201ENST00000278833 MRPS18BQ9Y676 258 aaKnown RBP22.37■■□□□ 1.17
ROM1-201ENST00000278833 TMEM200CA6NKL6 621 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 H3BUI4 141 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 PMS2P2O95744 297 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 CD3DP04234 171 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 HEXBP07686 556 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 M6PRP20645 277 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 HSD11B1P28845 292 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 RAB14P61106 215 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 TLE3Q04726 772 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 FOXF1Q12946 379 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 SHBQ15464 509 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 NHLRC3Q5JS37 347 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 RAB12Q6IQ22 244 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.36■■□□□ 1.17
ROM1-201ENST00000278833 OR5L2Q8NGL0 311 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 WDR77Q9BQA1 342 aaPredicted RBP22.36■■□□□ 1.17
ROM1-201ENST00000278833 EDEM2Q9BV94 578 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 FAM206AQ9NX38 181 aa22.36■■□□□ 1.17
ROM1-201ENST00000278833 SEC16AO15027 2179 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 VSTM2BA6NLU5 285 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 H3BSH0 61 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 SEC61A1P61619 476 aaKnown RBP22.35■■□□□ 1.17
ROM1-201ENST00000278833 NKAIN1Q4KMZ8 207 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 OR52B4Q8NGK2 314 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 FBLN5Q9UBX5 448 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 FREM3P0C091 2139 aa22.35■■□□□ 1.17
ROM1-201ENST00000278833 IGHV3-20A0A0C4DH32 117 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 TMEM269A0A1B0GVZ9 245 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 F5H5P2 479 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 B3GALNT1O75752 331 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 CALCRP30988 508 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 POU3F1Q03052 451 aaPredicted RBP22.34■■□□□ 1.17
ROM1-201ENST00000278833 FMODQ06828 376 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 ZMYND11Q15326 602 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 ZNF239Q16600 458 aaKnown RBP22.34■■□□□ 1.17
ROM1-201ENST00000278833 TMEM205Q6UW68 189 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 C3P1Q6ZMU1 363 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 MUC20Q8N307 709 aaPredicted RBP22.34■■□□□ 1.17
ROM1-201ENST00000278833 NPAS1Q99742 590 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 MOB1AQ9H8S9 216 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 SLC2A8Q9NY64 477 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 RPH3AQ9Y2J0 694 aaPredicted RBP22.34■■□□□ 1.17
ROM1-201ENST00000278833 DNAH14Q0VDD8 3507 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 RAD1O60671 282 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 ARPC4P59998 168 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 PMPCAQ10713 525 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 POU4F3Q15319 338 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 ZNF529Q6P280 563 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 RHOUQ7L0Q8 258 aa22.34■■□□□ 1.17
ROM1-201ENST00000278833 COMMD7Q86VX2 200 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms