RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RNFT2Q96EX2 444 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 RADILQ96JH8 1075 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 ABHD6Q9BV23 337 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 JAM3Q9BX67 310 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 PLEK2Q9NYT0 353 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 PCDHGB1Q9Y5G3 927 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 DCHS2Q6V1P9 2916 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 IGHV2OR16-5A0A0B4J2B6 119 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 M0R1B8 84 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 PHYHO14832 338 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 DOK2O60496 412 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 LYNP07948 512 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 OR2T7P0C7T2 308 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 PIPP12273 146 aaPredicted RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 STOMP27105 288 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 NUDT6P53370 316 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 CSNK2BP67870 215 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 ROM1Q03395 351 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 EGFL6Q8IUX8 553 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 OR1J2Q8NGS2 313 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 OR2T27Q8NH04 317 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 OR1F12Q8NHA8 337 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 ASB17Q8WXJ9 295 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 LGALS12Q96DT0 336 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 DCLRE1CQ96SD1 692 aaKnown RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 C1QTNF6Q9BXI9 259 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 Q9H521 79 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 FGF20Q9NP95 211 aaPredicted RBP12.23□□□□□ -0.45
VPS25-201ENST00000253794 PKDREJQ9NTG1 2253 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 NBPF19A0A087WUL8 3843 aa12.23□□□□□ -0.45
VPS25-201ENST00000253794 HECTD1Q9ULT8 2610 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 IRGMA1A4Y4 181 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 J3QW42 95 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 IGHA1P01876 353 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 MRPL3P09001 348 aaKnown RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 PCSK6P29122 969 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 APLNRP35414 380 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 OPRL1P41146 370 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ACTC1P68032 377 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ACTA1P68133 377 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 EIF2B1Q14232 305 aaKnown RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 TBC1D28Q2M2D7 210 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 KLHL22Q53GT1 634 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 C6orf141Q5SZD1 244 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 SLC35F2Q8IXU6 374 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 OR4F15Q8NGB8 312 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 SLAMF6Q96DU3 332 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 AMELYQ99218 206 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 ATF6BQ99941 703 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 FKBP14Q9NWM8 211 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 CNOT2Q9NZN8 540 aaKnown RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 LAMP5Q9UJQ1 280 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 KLHDC2Q9Y2U9 406 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 HRNRQ86YZ3 2850 aaPredicted RBP12.22□□□□□ -0.45
VPS25-201ENST00000253794 CENPEQ02224 2701 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 UNC79Q9P2D8 2635 aa12.22□□□□□ -0.45
VPS25-201ENST00000253794 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 ABCD4O14678 606 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 CTAG2O75638 210 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 FADS2O95864 444 aaKnown RBP12.21□□□□□ -0.45
VPS25-201ENST00000253794 CRYAAP02489 173 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 CD3EP07766 207 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 CCDC159P0C7I6 412 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 COL8A1P27658 744 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 CALCRP30988 508 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 DCTDP32321 178 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 HTR5AP47898 357 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 GDI2P50395 445 aaKnown RBP12.21□□□□□ -0.45
VPS25-201ENST00000253794 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
VPS25-201ENST00000253794 EGR3Q06889 387 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 ZNF684Q5T5D7 378 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 KCTD18Q6PI47 426 aaPredicted RBP12.21□□□□□ -0.45
VPS25-201ENST00000253794 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 INPP5EQ9NRR6 644 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 PSORS1C1Q9UIG5 152 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 COPS3Q9UNS2 423 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 RNF115Q9Y4L5 304 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 LRRC42Q9Y546 428 aa12.21□□□□□ -0.45
VPS25-201ENST00000253794 CRYBG3Q68DQ2 2970 aa12.21□□□□□ -0.46
VPS25-201ENST00000253794 ASH1LQ9NR48 2969 aaKnown RBP12.2□□□□□ -0.46
VPS25-201ENST00000253794 CELSR2Q9HCU4 2923 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 EFCAB10A6NFE3 127 aa12.2□□□□□ -0.46
VPS25-201ENST00000253794 ZNF670-ZNF695F2Z2N8 137 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms