RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 CEACAM19Q7Z692 300 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SYT9Q86SS6 491 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ZFP41Q8N8Y5 198 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 OR6N1Q8NGY5 312 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 OR2AJ1Q8NGZ0 328 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ST7LQ8TDW4 575 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ABTB1Q969K4 478 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 TRMT61AQ96FX7 289 aaKnown RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 C4orf45Q96LM5 186 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 CMTM3Q96MX0 182 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 HDHD5Q9BXW7 423 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 LINC00470Q9BZP3 86 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SMURF1Q9HCE7 757 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 GLRX2Q9NS18 164 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ISPDA4D126 451 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 OR4C45A6NMZ5 311 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF814B7Z6K7 855 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF878C9JN71 531 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 DHHO43323 396 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CXCL13O43927 109 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 QDPRP09417 244 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 UBCP0CG48 685 aaKnown RBP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CD8BP10966 210 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF12P17014 697 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 TCEA1P23193 301 aaKnown RBP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CTSSP25774 331 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 OPRL1P41146 370 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 MAGEA5P43359 124 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 EIF1AXP47813 144 aaKnown RBP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 PPP5CP53041 499 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CLDN15P56746 228 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CLDN20P56880 219 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 GRB2P62993 217 aaKnown RBP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 PPP3R1P63098 170 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 SF3B4Q15427 424 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CHMP1BQ7LBR1 199 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-201ENST00000238688 MFSD4AQ8N468 514 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 RFLNBQ8N5W9 214 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 C11orf40Q8WZ69 217 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 RELTQ969Z4 430 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 CCDC32Q9BV29 185 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 SRXN1Q9BYN0 137 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ZCCHC4Q9H5U6 513 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 BCO1Q9HAY6 547 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 ELOVL3Q9HB03 270 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 POLE4Q9NR33 117 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 SNTG1Q9NSN8 517 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 POLR1DQ9Y2S0 133 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 UGT2A1Q9Y4X1 527 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 R4GMQ9 66 aa11.66□□□□□ -0.54
SLIRP-201ENST00000238688 TRGV5A0A0B4J1U4 118 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 SLC19A2O60779 497 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ZG16O60844 167 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ZFPL1O95159 310 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 CD2P06729 351 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 CALRP27797 417 aaKnown RBP11.65□□□□□ -0.54
SLIRP-201ENST00000238688 CFPP27918 469 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 CAPZA1P52907 286 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 HCCSP53701 268 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 RPS11P62280 158 aaKnown RBP eCLIP11.65□□□□□ -0.54
SLIRP-201ENST00000238688 FMODQ06828 376 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ECH1Q13011 328 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 HNRNPA0Q13151 305 aaKnown RBP11.65□□□□□ -0.54
SLIRP-201ENST00000238688 HSD17B12Q53GQ0 312 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM244Q5VVB8 128 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 LRFN4Q6PJG9 635 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 KLHL24Q6TFL4 600 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 LYPD4Q6UWN0 246 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 DCXRQ7Z4W1 244 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 DPPA2Q7Z7J5 298 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 CCDC190Q86UF4 302 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 MINDY2Q8NBR6 621 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 GJC3Q8NFK1 279 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 DNAJA3Q96EY1 480 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 MAP6Q96JE9 813 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 SLC30A2Q9BRI3 323 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ULBP2Q9BZM5 246 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 DDX28Q9NUL7 540 aaKnown RBP11.65□□□□□ -0.54
SLIRP-201ENST00000238688 SLCO1C1Q9NYB5 712 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ATPIF1Q9UII2 106 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 KLHDC2Q9Y2U9 406 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 LRP12Q9Y561 859 aa11.65□□□□□ -0.54
SLIRP-201ENST00000238688 ABCA12Q86UK0 2595 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms