RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 EIF3KQ9UBQ5 218 aaKnown RBP11.48□□□□□ -0.57
SNX1-214ENST00000625244 CLN8Q9UBY8 286 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 VPREB3Q9UKI3 123 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 ZNF443Q9Y2A4 671 aaPredicted RBP11.48□□□□□ -0.57
SNX1-214ENST00000625244 PCDHGB5Q9Y5G0 923 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 C5orf49A4QMS7 147 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 ZNF879B4DU55 563 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 SLC22A2O15244 555 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
SNX1-214ENST00000625244 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
SNX1-214ENST00000625244 SNX3O60493 162 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 ENTPD5O75356 428 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 CYB5R3P00387 301 aaPredicted RBP11.47□□□□□ -0.57
SNX1-214ENST00000625244 TNFSF4P23510 183 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 EFNB2P52799 333 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 PPP1CBP62140 327 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 TXNL4AP83876 142 aaKnown RBP11.47□□□□□ -0.57
SNX1-214ENST00000625244 HSF2Q03933 536 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 PUDPQ08623 228 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 PSG7Q13046 419 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 RNF220Q5VTB9 566 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 LRRC18Q8N456 261 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
SNX1-214ENST00000625244 ABHD4Q8TB40 342 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 TSPEARQ8WU66 669 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 FAM53CQ9NYF3 392 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 NDUFAF1Q9Y375 327 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 CAPN7Q9Y6W3 813 aa11.47□□□□□ -0.57
SNX1-214ENST00000625244 BGLAPP02818 100 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 AHCYP23526 432 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 SLC6A2P23975 617 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 KRTAP10-11P60412 298 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 COX10Q12887 443 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 PGBD2Q6P3X8 592 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 SLC2A7Q6PXP3 512 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 C5orf46Q6UWT4 87 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 ZNF841Q6ZN19 808 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 PXKQ7Z7A4 578 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 FUNDC1Q8IVP5 155 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 PDZD9Q8IXQ8 264 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 R3HDM4Q96D70 268 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 OR2V2Q96R30 315 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 SEMA6AQ9H2E6 1030 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 RAD21L1Q9H4I0 556 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 SAR1AQ9NR31 198 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 IL19Q9UHD0 177 aa11.46□□□□□ -0.57
SNX1-214ENST00000625244 TMEM247A6NEH6 219 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 ANKRD61A6NGH8 418 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 BBIP1A8MTZ0 92 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 LRRN3E7EW58 273 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 RNASEK-C17orf49H0YIS7 233 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 PLPP3O14495 311 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 DCTN3O75935 186 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 PPIBP23284 216 aaKnown RBP11.45□□□□□ -0.58
SNX1-214ENST00000625244 CDKN2CP42773 168 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 KLF10Q13118 480 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 ZNF404Q494X3 552 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 FAM201AQ5SY85 155 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 VASH1Q7L8A9 365 aaPredicted RBP11.45□□□□□ -0.58
SNX1-214ENST00000625244 OR6X1Q8NH79 312 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 PPP1R35Q8TAP8 253 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 GTF2H4Q92759 462 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 WDFY2Q96P53 400 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 ASPNQ9BXN1 380 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 PPA2Q9H2U2 334 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 C12orf10Q9HB07 376 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 MRPL39Q9NYK5 338 aaKnown RBP11.45□□□□□ -0.58
SNX1-214ENST00000625244 CORO2BQ9UQ03 480 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 ARL2BPQ9Y2Y0 163 aa11.45□□□□□ -0.58
SNX1-214ENST00000625244 EVPLLA8MZ36 301 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 C11orf98E9PRG8 122 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 H3BSA7 217 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 PHYHO14832 338 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 FAM107AO95990 144 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 QDPRP09417 244 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
SNX1-214ENST00000625244 NFYCQ13952 458 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 CYLC2Q14093 348 aaPredicted RBP11.44□□□□□ -0.58
SNX1-214ENST00000625244 ZBTB37Q5TC79 503 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 UNQ6126/PRO20091Q6UXV3 157 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 PTOV1Q86YD1 416 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 PCYOX1LQ8NBM8 494 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 AKR7LQ8NHP1 331 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 ZNF566Q969W8 418 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 SPATA9Q9BWV2 254 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 SIRPDQ9H106 197 aa11.44□□□□□ -0.58
SNX1-214ENST00000625244 TPT1P8Q9HAU6 139 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms