RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 OR10H5Q8NGA6 315 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 SYT3Q9BQG1 590 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 RHNO1Q9BSD3 238 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 REG4Q9BYZ8 158 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 RAB1BQ9H0U4 201 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 FN3KQ9H479 309 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 MYEF2Q9P2K5 600 aaKnown RBP14.37□□□□□ -0.11
SSBP4-213ENST00000602088 ASH2LQ9UBL3 628 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 EIF3KQ9UBQ5 218 aaKnown RBP14.37□□□□□ -0.11
SSBP4-213ENST00000602088 FZR1Q9UM11 496 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 BAIAP2Q9UQB8 552 aa14.37□□□□□ -0.11
SSBP4-213ENST00000602088 TLN2Q9Y4G6 2542 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 RNF223E7ERA6 249 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 SGCEO43556 437 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 ICMTO60725 284 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 E2F6O75461 281 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 CLPTM1O96005 669 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 TFP02787 698 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 ZNF250P15622 560 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 HIST1H3AP68431 136 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 GLO1Q04760 184 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 MEP1BQ16820 701 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 HIST2H3PS2Q5TEC6 136 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 C1orf146Q5VVC0 180 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 HIST2H3AQ71DI3 136 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 VASH1Q7L8A9 365 aaPredicted RBP14.36□□□□□ -0.11
SSBP4-213ENST00000602088 HS3ST5Q8IZT8 346 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 CYB561A3Q8NBI2 242 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 OR4Q3Q8NH05 313 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 MS4A5Q9H3V2 200 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 ARMC1Q9NVT9 282 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 DUSP13Q9UII6 198 aa14.36□□□□□ -0.11
SSBP4-213ENST00000602088 NDRG4Q9ULP0 352 aaKnown RBP14.36□□□□□ -0.11
SSBP4-213ENST00000602088 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 M0R233 179 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 DOK2O60496 412 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 TIPRLO75663 272 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 ANXA8P13928 327 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 PRKACGP22612 351 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 KLF3P57682 345 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-213ENST00000602088 SELENOVP59797 346 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 CCDC92Q53HC0 331 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-213ENST00000602088 UNQ6126/PRO20091Q6UXV3 157 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-213ENST00000602088 C1orf174Q8IYL3 243 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 SLC37A3Q8NCC5 494 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 ICA1LQ8NDH6 482 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 OR1J1Q8NGS3 322 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 SYNPRQ8TBG9 265 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 FAM168AQ92567 244 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 UTP4Q969X6 686 aaKnown RBP14.35□□□□□ -0.11
SSBP4-213ENST00000602088 PLEK2Q9NYT0 353 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 KLHL21Q9UJP4 597 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 NSD1Q96L73 2696 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-213ENST00000602088 CSPG4Q6UVK1 2322 aa14.35□□□□□ -0.11
SSBP4-213ENST00000602088 OR6C6A6NF89 314 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 FAM171A2A8MVW0 826 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 H3BN98 237 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 RER1O15258 196 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 DEAF1O75398 565 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 NGFP01138 241 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 CSF3P09919 207 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 HTR5AP47898 357 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ARHGDIAP52565 204 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 TEKQ02763 1124 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 CCNIQ14094 377 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ARL9Q6T311 187 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 CCDC121Q6ZUS5 278 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 GJC3Q8NFK1 279 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 OR2T4Q8NH00 348 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 TEX47Q8TBZ9 253 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 NEU4Q8WWR8 484 aaPredicted RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 NRBF2Q96F24 287 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 DUS3LQ96G46 650 aaKnown RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 C4orf45Q96LM5 186 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 RBM4Q9BWF3 364 aaKnown RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 NMNAT2Q9BZQ4 307 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ZNF556Q9HAH1 456 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ELOVL3Q9HB03 270 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 ATPIF1Q9UII2 106 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 POLR1DQ9Y2S0 133 aa14.34□□□□□ -0.11
SSBP4-213ENST00000602088 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
SSBP4-213ENST00000602088 LY6G6DO95868 133 aa14.33□□□□□ -0.12
SSBP4-213ENST00000602088 IGHV3-13P01766 116 aa14.33□□□□□ -0.12
SSBP4-213ENST00000602088 HLA-DQA2P01906 255 aa14.33□□□□□ -0.12
SSBP4-213ENST00000602088 ERCC1P07992 297 aaPredicted RBP14.33□□□□□ -0.12
SSBP4-213ENST00000602088 SLC25A16P16260 332 aa14.33□□□□□ -0.12
SSBP4-213ENST00000602088 PYCR1P32322 319 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms