RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IGKV1D-43A0A0B4J1Z2 117 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 FBP2O00757 339 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 NGFP01138 241 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 IGHV2-70P01814 119 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 SBK2P0C263 348 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 PPIAL4GP0DN37 164 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 PRTN3P24158 256 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 OR1E2P47887 323 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 SLC6A9P48067 706 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 PRKCDQ05655 676 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 TTMPQ5BVD1 217 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 RABL3Q5HYI8 236 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 RFPL4BQ6ZWI9 263 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 MUC20Q8N307 709 aaPredicted RBP15.05■□□□□ -0
SHKBP1-227ENST00000602011 PTP4A1Q93096 173 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 HAVCR1Q96D42 359 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 MRI1Q9BV20 369 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 ZNF696Q9H7X3 374 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 POLE4Q9NR33 117 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 IL20RAQ9UHF4 553 aa15.05■□□□□ -0
SHKBP1-227ENST00000602011 POM121CA8CG34 1229 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 A8MXK9 166 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 ZNF154Q13106 437 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 TOP3AQ13472 1001 aaPredicted RBP15.04■□□□□ -0
SHKBP1-227ENST00000602011 TRAM2Q15035 370 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 ARMCX4Q5H9R4 360 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 PRR31Q5SQ13 230 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 ZNF774Q6NX45 483 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 LRRC75AQ8NAA5 344 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 OR5L1Q8NGL2 311 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 DCLRE1CQ96SD1 692 aaKnown RBP15.04■□□□□ -0
SHKBP1-227ENST00000602011 FNDC11Q9BVV2 318 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 MSL2Q9HCI7 577 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 ESM1Q9NQ30 184 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 GRHPRQ9UBQ7 328 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 EGFL7Q9UHF1 273 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 A4GNTQ9UNA3 340 aa15.04■□□□□ -0
SHKBP1-227ENST00000602011 TRRAPQ9Y4A5 3859 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 A0A1W2PPL8 197 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 ELOVL7A1L3X0 281 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 EFCAB9A8MZ26 197 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 FAM220BPB1ANY3 271 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 CLDN34H7C241 214 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 FXYD1O00168 92 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 XKRYO14609 159 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 MRASO14807 208 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 FSTL3O95633 263 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 IFNW1P05000 195 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 H2AFXP16104 143 aaPredicted RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 ZNF12P17014 697 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 TNFRSF1BP20333 461 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 ZFP36P26651 326 aaKnown RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 RGS6P49758 472 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 BTG1P62324 171 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 ENDOGQ14249 297 aaKnown RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 RRM2BQ7LG56 351 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 OFCC1Q8IZS5 231 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 DEFB108BQ8NET1 73 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 OR2T12Q8NG77 320 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 OR51A7Q8NH64 312 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 GEMIN6Q8WXD5 167 aaKnown RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 ACOT11Q8WXI4 607 aaPredicted RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 THOC1Q96FV9 657 aaKnown RBP15.03■□□□□ -0
SHKBP1-227ENST00000602011 TPD52L3Q96J77 140 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 ATPIF1Q9UII2 106 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 PPP1R3CQ9UQK1 317 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 INSIG2Q9Y5U4 225 aa15.03■□□□□ -0
SHKBP1-227ENST00000602011 SGCEO43556 437 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 SHOX2O60902 331 aaPredicted RBP15.02■□□□□ -0
SHKBP1-227ENST00000602011 CD14P08571 375 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 TROVE2P10155 538 aaKnown RBP eCLIP15.02■□□□□ -0
SHKBP1-227ENST00000602011 RAC2P15153 192 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 MDH2P40926 338 aaKnown RBP15.02■□□□□ -0
SHKBP1-227ENST00000602011 MTNR1AP48039 350 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 LSM6P62312 80 aaKnown RBP15.02■□□□□ -0
SHKBP1-227ENST00000602011 LRRC23Q53EV4 343 aaPredicted RBP15.02■□□□□ -0
SHKBP1-227ENST00000602011 ESCO2Q56NI9 601 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 TMEM255AQ5JRV8 349 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 TMPRSS11FQ6ZWK6 438 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 ZNF771Q7L3S4 317 aaPredicted RBP15.02■□□□□ -0
SHKBP1-227ENST00000602011 HDXQ7Z353 690 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 ARPINQ7Z6K5 226 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 NRMQ8IXM6 262 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 OR2Z1Q8NG97 314 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 ANKRD19PQ9H560 264 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 VIPAS39Q9H9C1 493 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 LRCH1Q9Y2L9 728 aa15.02■□□□□ -0
SHKBP1-227ENST00000602011 RPL4P36578 427 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 HTR5AP47898 357 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 GUCY1A3Q02108 690 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 KLF10Q13118 480 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 AQP6Q13520 282 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 GPR139Q6DWJ6 353 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 LRRN1Q6UXK5 716 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 MICU2Q8IYU8 434 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 SIGLECL1Q8N7X8 197 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 C22orf15Q8WYQ4 148 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 SLC25A28Q96A46 364 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 RASD2Q96D21 266 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 CMBLQ96DG6 245 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms