RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZNF544Q6NX49 715 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 CORO6Q6QEF8 472 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 PAMR1Q6UXH9 720 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 TUSC5Q8IXB3 177 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 OR2G2Q8NGZ5 317 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 LINC00470Q9BZP3 86 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 GP6Q9HCN6 339 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 FRRS1LQ9P0K9 344 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF281Q9Y2X9 895 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 AKAP13Q12802 2813 aa15.59■□□□□ 0.09
SHKBP1-224ENST00000600718 OR6C65A6NJZ3 312 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 SC5DO75845 299 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 CDRT1O95170 752 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 CRYABP02511 175 aaKnown RBP15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 FCGR2AP12318 317 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 NPR2P20594 1047 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 MRPS34P82930 218 aaKnown RBP15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 ACSM3Q53FZ2 586 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 SPATC1Q76KD6 591 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 RHOUQ7L0Q8 258 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 CEACAM19Q7Z692 300 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 S100ZQ8WXG8 99 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 SLAMF6Q96DU3 332 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 MAP6Q96JE9 813 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 GDF2Q9UK05 429 aaPredicted RBP15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 RAXQ9Y2V3 346 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 LRP12Q9Y561 859 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 A3GALT2U3KPV4 340 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 PMF1-BGLAPU3KQ54 211 aa15.58■□□□□ 0.09
SHKBP1-224ENST00000600718 SLC22A20A6NK97 555 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 GATBO75879 557 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 H2BFMP0C1H6 154 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 OPRL1P41146 370 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 CCR9P51686 369 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 INSL4Q14641 139 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 PLEKHN1Q494U1 663 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 YIF1BQ5BJH7 314 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 PLXDC2Q6UX71 529 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 OR5AK2Q8NH90 309 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 HSD17B8Q92506 261 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 NABP1Q96AH0 204 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 PDCD1LG2Q9BQ51 273 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 SLCO5A1Q9H2Y9 848 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 CALHM2Q9HA72 323 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 CRLF2Q9HC73 371 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 CENPMQ9NSP4 180 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 LHX6Q9UPM6 363 aa15.58■□□□□ 0.08
SHKBP1-224ENST00000600718 WISP2O76076 250 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 ZFPL1O95159 310 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 DCTDP32321 178 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 SDC2P34741 201 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 RORCP51449 518 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF404Q494X3 552 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 OR7E24Q6IFN5 339 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 TEX19Q8NA77 164 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 MCFD2Q8NI22 146 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 PHYHIPQ92561 330 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF416Q9BWM5 594 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 NXF2Q9GZY0 626 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 MMP27Q9H306 513 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 GPR35Q9HC97 309 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 SNTG1Q9NSN8 517 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 ASH2LQ9UBL3 628 aa15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 TNRC6AQ8NDV7 1962 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-224ENST00000600718 OR14I1A6ND48 311 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 TMEM212A6NML5 194 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 OR4C45A6NMZ5 311 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 WNT11O96014 354 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 RPS11P62280 158 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 STK11Q15831 433 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 FAM27BQ5VT28 67 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 UNQ9370/PRO34162Q6UXP9 181 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 ADGRE4PQ86SQ3 457 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 EXTL1Q92935 676 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF837Q96EG3 531 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 C4orf45Q96LM5 186 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 COMMD4Q9H0A8 199 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 AKIP1Q9NQ31 210 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 R4GMQ9 66 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 A0A1B0GTH9 108 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 KRT33AO76009 404 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 TGM6O95932 706 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 MTNR1BP49286 362 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 ENDOGQ14249 297 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 ZMAT1Q5H9K5 638 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 TSPO2Q5TGU0 170 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 CFAP77Q6ZQR2 320 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 PRSS35Q8N3Z0 413 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 HTRA1Q92743 480 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 SLC25A46Q96AG3 418 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 GLRX2Q9NS18 164 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 TMEM38BQ9NVV0 291 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 CLEC4AQ9UMR7 237 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 TP53TG5Q9Y2B4 290 aa15.56■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF878C9JN71 531 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 CASKO14936 926 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 SRSF10O75494 262 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 MXD1Q05195 221 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 LINGO2Q7L985 606 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms